| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RSc0054 |
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| Symbol | gatB |
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| ID | 1218856 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ralstonia solanacearum GMI1000 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_003295 |
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| Strand | - |
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| Start bp | 59072 |
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| End bp | 60538 |
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| Gene Length | 1467 bp |
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| Protein Length | 488 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 637236410 |
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| Product | aspartyl/glutamyl-tRNA amidotransferase subunit B |
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| Protein accession | NP_518175 |
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| Protein GI | 17544773 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0064] Asp-tRNAAsn/Glu-tRNAGln amidotransferase B subunit (PET112 homolog) |
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| TIGRFAM ID | [TIGR00133] glutamyl-tRNA(Gln) and/or aspartyl-tRNA(Asn) amidotransferase, B subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.184325 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 22 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCAATGGG AAGTGGTGAT CGGCCTCGAA ACGCACGCAC AGCTTTCGAC CGCCTCGAAG
ATTTTCTCCG GCGCCTCCAC CGCCTTCGGC GCGGCGCCCA ACACGCAGGC CGCGCCGGTT
GATCTGGCGC TGCCCGGCGT GCTGCCGGTG CTCAACAAGG GCGCCGTCGA GCGCGCCATC
ACGTTCGGCC TGGCCATCGG GGCCAAGATC GCGTCCAAGA GCATCTTCGC GCGCAAGAAT
TACTTCTACC CCGATCTGCC CAAGGGCTAC CAGATCAGCC AGTATGAGAT TCCGGTGGTG
CAGGGCGGCA CGCTGACCAT CCAGGTGGAA GGCAGGAACG GGCAGCCCGG CTACGAGAAG
ACCGTCAACC TGACGCGCGC CCACCTGGAA GAAGACGCCG GCAAATCGCT GCACGAAGAC
TTCGCCGGCA TGACCGGCAT CGACCTGAAC CGCGCCGGCA CGCCGCTGCT GGAGATCGTC
ACCGAGCCCG ACATGCGCAG CGCGGCCGAA GCCGTGGCGT ATGCCCGCGC GCTGCACGCG
CTGGTGATGT GGCTGGGCAT CTGCGACGGC AACATGCAGG AAGGCAGCTT CCGCTGCGAT
GCCAACGTCT CGGTGCGCCG GGGCCCGGAC GCGCCGTTCG GCACACGCTG CGAGATCAAG
AACCTGAACT CGTTCCGCTT CCTGGAAGAG GCCATCAACT ACGAAGTGCG CCGCCAGATC
GAGCTGATCG AGGACGGCGG CACCGTGGTG CAGGAAACCC GCCTGTACGA CCCCGACCGC
AAGGAAACGC GCTCGATGCG CAGCAAGGAA GACGCGCACG ACTACCGCTA CTTCCCCGAC
CCCGACCTGC TGCCGCTGAT GATCGGCGCC GACTGGGTGG ACGCGGTGCG CGCCACGCTG
CCGGAGCTGC CCGCCGCCAT GGCCGCGCGC TTCGAATCGG CCTACGGCCT GCCCCGGTAC
GACGCCAGCA TCCTGACCGC CACCAAAGCC ACCGCCGCCT ACTTCGAGGC CGTGGTGGCC
GCCGCCGGCG CGGCCAACGC CAAGGCGGCC GCCAACTGGA TCATGGGCGA GGTGGCCTCG
AACCTGAACC GCGCCGGGCT GGAGATCGAT GCCGCGCCGG TGTCGCCCGT GCAACTGGCC
GGGCTGCTGG CGCGCATCGC CGACGGCACC ATCTCCAACA ACACCGCCAA GAAGGACGTC
TTCCCCGCCA TGTGGGCCGG CGAGCACGGC GGTGACGCCG ACGCCATCAT CGCCGAGAAG
GGCCTCAAGC AGATGTCGGA TTCCGGCGAG CTGGAGAAGA TCATCGACGA GGTGCTGGCA
GCCAACGCCA AGTCGGTCGA GGAATTCCGC GCCGGCAAGG ACAAGGCTTT CAACGCGCTG
GTGGGCCAGG CGATGAAGGC CACGCGCGGC AAGGCCAACC CGAGCCAGGT CAACGAACTG
CTGAAGAAGA AACTGGGCGC AGCCTGA
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| Protein sequence | MQWEVVIGLE THAQLSTASK IFSGASTAFG AAPNTQAAPV DLALPGVLPV LNKGAVERAI
TFGLAIGAKI ASKSIFARKN YFYPDLPKGY QISQYEIPVV QGGTLTIQVE GRNGQPGYEK
TVNLTRAHLE EDAGKSLHED FAGMTGIDLN RAGTPLLEIV TEPDMRSAAE AVAYARALHA
LVMWLGICDG NMQEGSFRCD ANVSVRRGPD APFGTRCEIK NLNSFRFLEE AINYEVRRQI
ELIEDGGTVV QETRLYDPDR KETRSMRSKE DAHDYRYFPD PDLLPLMIGA DWVDAVRATL
PELPAAMAAR FESAYGLPRY DASILTATKA TAAYFEAVVA AAGAANAKAA ANWIMGEVAS
NLNRAGLEID AAPVSPVQLA GLLARIADGT ISNNTAKKDV FPAMWAGEHG GDADAIIAEK
GLKQMSDSGE LEKIIDEVLA ANAKSVEEFR AGKDKAFNAL VGQAMKATRG KANPSQVNEL
LKKKLGAA
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