Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RSc0032 |
Symbol | |
ID | 1218834 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ralstonia solanacearum GMI1000 |
Kingdom | Bacteria |
Replicon accession | NC_003295 |
Strand | - |
Start bp | 37895 |
End bp | 38758 |
Gene Length | 864 bp |
Protein Length | 287 aa |
Translation table | 11 |
GC content | 72% |
IMG OID | 637236388 |
Product | hypothetical protein |
Protein accession | NP_518153 |
Protein GI | 17544751 |
COG category | [R] General function prediction only |
COG ID | [COG1011] Predicted hydrolase (HAD superfamily) |
TIGRFAM ID | [TIGR01509] haloacid dehalogenase superfamily, subfamily IA, variant 3 with third motif having DD or ED [TIGR01993] pyrimidine 5'-nucleotidase |
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Plasmid Coverage information |
Num covering plasmid clones | 26 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 16 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCGCACGG CCCGGGCGCC CCGGGCGCGC CATGCCGGGC GCGCCTGGCC GCGAGAGGTT GCGGCGCCCG GCCTGCCGCG GCGGCAGCCG GTCTGGCTGT TCGACCTCGA CAACACCCTC CACCACGCTT CGCACGCGAT CTTCCCGCAG ATCAACCGTC TGATGACGGC CTACGTGGCG CGCGTGCTCG GCACCGACGA GGCCACCGCC AGCCGGGTCC GCGTCGACTA CTGGCGCCGC TACGGCGCCA CCATCCTCGG CATGGTGCGC CATCACGGCG TCGATCCCGA CGATTTCCTT GCCCAGGCCC ACCGCTTCGA CGACCTGCGC GCCATGGTGC GCGCCGAACG CGGCCTGGCC CAGCTGCTGC GCGCGCTGCC CGGGCGCAAG ATCCTGCTGA CCAACGCTCC GGCCGCGTAC GCGCGCGAGG TGGTGCGCCA CATCGGCCTG CGGCGCGCCT TCGCACGCGA GATCGCCGTC GAGCACATGT GGGTGCACCG GCGCCTGCGC CCCAAACCCG ACCCGCTGAT GCTGCGCCGG CTGCTGGCGC GCGAACGCAT CGCGCCGTCG CGCGCCATCC TGGTCGAAGA CACGCTCTCG CACCTCAAGC GCTACCGGCG CCTGGGGTTG AGCACGGTGT GGGTCACCGG CTACCTGCGG CGCGTGGCGC CCGGCGTGGT CCCGGCAGCG GCCGCCGATG CACTGCACCC GATGCAGGCC GCCGCGCTCG GCGCGCGTGC AAATTCGCCA CAACGGCAAC CCGCCGCGCC GATTTTGTTC GCCAACCGGC CCGGCTATGT GAGCGTGAAA GTAAAATCGG TGCTTCAACT ACAACGAAGG CTTGTCCGCC ACGGTCGTGG TTAG
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Protein sequence | MRTARAPRAR HAGRAWPREV AAPGLPRRQP VWLFDLDNTL HHASHAIFPQ INRLMTAYVA RVLGTDEATA SRVRVDYWRR YGATILGMVR HHGVDPDDFL AQAHRFDDLR AMVRAERGLA QLLRALPGRK ILLTNAPAAY AREVVRHIGL RRAFAREIAV EHMWVHRRLR PKPDPLMLRR LLARERIAPS RAILVEDTLS HLKRYRRLGL STVWVTGYLR RVAPGVVPAA AADALHPMQA AALGARANSP QRQPAAPILF ANRPGYVSVK VKSVLQLQRR LVRHGRG
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