Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RSc0029 |
Symbol | goaG |
ID | 1218831 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ralstonia solanacearum GMI1000 |
Kingdom | Bacteria |
Replicon accession | NC_003295 |
Strand | - |
Start bp | 34078 |
End bp | 35358 |
Gene Length | 1281 bp |
Protein Length | 426 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 637236385 |
Product | 4-aminobutyrate aminotransferase protein |
Protein accession | NP_518150 |
Protein GI | 17544748 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0160] 4-aminobutyrate aminotransferase and related aminotransferases |
TIGRFAM ID | [TIGR00700] 4-aminobutyrate aminotransferase, prokaryotic type |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 15 |
Fosmid unclonability p-value | 0.717101 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAACGCCA GAGACCCCCA GCACAACGCC CAATGGAACG CCCGCCGCCT GGCCGCCACA CCGCGCGGCG TCGGCGTCAT GACCGACCGC TACGCGGAAC ACGCCGAGAA CGCCCAGTTC TGGGACGTGG AAGGCAAGCG CTACATCGAC TTCGCGGCCG GCATCGCCGT GGTCAACACC GGCCACCGCC ATCCGCGCCT GGTGCAGGCC GTGCGCGAGC AGCTCGAGCG CTTCACCCAC ACCGCCTTCC AGATCGTGCC GTACGCCTCG TACGTCGAGC TGGCCGAGCG CCTGAACACG CTCACGCCCG GCGCGCATGC CAAGAAGACG GCATTCTTCT CCACCGGCGC CGAAGCCGTG GAGAACGCCA TCAAGATCGC GCGCGCCCAC ACTGGCCGCC CCGGCGTGAT CGCACTGACG GGCGCCTTCC ACGGCCGCAC CTTCATGGGC ATGTCGCTCA CCGGCAAGGT GGTGCCGTAC AAGACCGGCT TCGGTCCGTT CCCGGGCAGC ATCTATCACG TGCCGGCACC GATCGCGCTG CACGGCGTCA GCACGCAGGA TTCGCTCGAT GCGATCGGCC GCCTGTTCAA GGCCGACATC GACCCGCGCC AGGTCGCGGC CATCATCTTC GAGCCGGTGC AGGGCGAGGG CGGCTTCTAC CAGATGCCCG CCGATTTCGT GCGCGCCCTC CGCGCCCTGT GCGACGAGCA CGGCATCGTG ATGATCGCCG ACGAAGTGCA GACCGGCTTT GCCCGCACCG GCAAGCTGTT CGCCATGGAG CACACCGGCG TGCTGCCCGA CCTGGTGACG ATGGCCAAGG GCCTGGCCGG CGGCCTGCCG CTGTCGGCCG TCACCGGCCG CGCCGAGATC ATGGACGCGC CCGCCCCCGG CGGCCTGGGC GGTACCTACG CCGGCAACCC GCTGGCCGTA GCCGCCGCGC ACGCAGTGCT CGACATCATT GACGAGGAAA AGCTGTGCGA GCGCTCCGCC GCGCTGGGCC GGCGCCTGGT CGATGCGCTC GACGCCGCCA AGGCCGGCCA GCCGCGCATC GCCGAAGTGC GCGGCGTGGG CGCGATGGTT GCTATTGAAT TCAACACGCC CGACGGCAAG CCCGATGCCG ACTTCACCCG CACCGTGCAG CAGCGCGCGC TCGAAGCCGG CCTGCTGCTG CTATCGTGCG GCGTGTACGG CAACGTGATC CGCTTCCTGT TCCCGCTCAC CATCGAAGAC GCGGTATTCG AAGAGGGCCT TGCCATCCTG AAACACGCAC TGGAGGGCTG A
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Protein sequence | MNARDPQHNA QWNARRLAAT PRGVGVMTDR YAEHAENAQF WDVEGKRYID FAAGIAVVNT GHRHPRLVQA VREQLERFTH TAFQIVPYAS YVELAERLNT LTPGAHAKKT AFFSTGAEAV ENAIKIARAH TGRPGVIALT GAFHGRTFMG MSLTGKVVPY KTGFGPFPGS IYHVPAPIAL HGVSTQDSLD AIGRLFKADI DPRQVAAIIF EPVQGEGGFY QMPADFVRAL RALCDEHGIV MIADEVQTGF ARTGKLFAME HTGVLPDLVT MAKGLAGGLP LSAVTGRAEI MDAPAPGGLG GTYAGNPLAV AAAHAVLDII DEEKLCERSA ALGRRLVDAL DAAKAGQPRI AEVRGVGAMV AIEFNTPDGK PDADFTRTVQ QRALEAGLLL LSCGVYGNVI RFLFPLTIED AVFEEGLAIL KHALEG
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