Gene RSc0012 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRSc0012 
SymbolacrR 
ID1218814 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia solanacearum GMI1000 
KingdomBacteria 
Replicon accessionNC_003295 
Strand
Start bp13346 
End bp14005 
Gene Length660 bp 
Protein Length219 aa 
Translation table11 
GC content66% 
IMG OID637236368 
Productputative AcrAB operon repressor transcription regulator protein 
Protein accessionNP_518133 
Protein GI17544731 
COG category[K] Transcription 
COG ID[COG1309] Transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.631075 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value0.0464367 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGTCAGAC GAACCAAGGA AGAAGCGCTG GAAACGCGCA ACCGCATCCT CGACGCGGCG 
GAAGAGGTGT TCTATGTGCG TGGCGTGGCG CGCACGTCGC TATCCGACAT CGCGCAGGCG
GCCGGTGTCA CGCGCGGCGC CATCTACTGG CATTTCCGCA ACAAGGCCGA TGTGTTCGCC
GCCATGTGCG AGCGCGTCAA GCTGCCGATG GAGACCCTGT GCTCGCCGCT GGGCGTCGAA
CCCAACGATC CGCTGGGCGA GCTGCGCAAT GTGGCCAATT TCGTGCTGCA GCAGCTGGTG
GAAGACATGC ACTGGCGCCG GGTCTTCGAG ATCATGTTCA ACAAGTGCGA GTTCGTGGAG
GACACGAGCC CGATCCTCAA GCGCCAGCAG GAGTCCTTCG AGGAGGGGCT TGCACGCCTG
ACCCACATCA TCGGGCAGGC GGCCCGGCGC GGGCAGCTGC CGCCCGACCT GGATGTGCCG
CTGGCGGTGG CGCATTTCCA CGCCTCGTTC GGCGGCATCA TGGGCGACTA CCTGTTCTAT
CCGGACGCCT CCAGCCTCGC CGTCAAGCGC GAGCGCTTCG TCGATGCCTG CATCGACACA
CTCAAGTACT CGCCCGCGCT GCGCCTGGCG CAGCCCGTCG TCGCCGAGGC TTGTGCATGA
 
Protein sequence
MVRRTKEEAL ETRNRILDAA EEVFYVRGVA RTSLSDIAQA AGVTRGAIYW HFRNKADVFA 
AMCERVKLPM ETLCSPLGVE PNDPLGELRN VANFVLQQLV EDMHWRRVFE IMFNKCEFVE
DTSPILKRQQ ESFEEGLARL THIIGQAARR GQLPPDLDVP LAVAHFHASF GGIMGDYLFY
PDASSLAVKR ERFVDACIDT LKYSPALRLA QPVVAEACA