Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RS05738 |
Symbol | rRNA-23S |
ID | 1220259 |
Type | rRNA |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ralstonia solanacearum GMI1000 |
Kingdom | Bacteria |
Replicon accession | NC_003295 |
Strand | + |
Start bp | 1534736 |
End bp | 1537553 |
Gene Length | 2818 bp |
Protein Length | |
Translation table | |
GC content | 53% |
IMG OID | 640697162 |
Product | 23S ribosomal RNA |
Protein accession | |
Protein GI | |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 3 |
Plasmid unclonability p-value | 0.00792768 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | 15 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GGTCAAGCGA ATAAGTGCAT GTGGTGGATG CCTTGGCGAT CACAGGCGAT GAAGGACGTA GTAGCTTGCG AAAAGCTGCG GGGAGCTGGC AAACGAGCTT TGATCCGCAG ATGTCCGAAT GGGGAAACCC GGCCCGTATG GGTCATCCCT TGCTGAATAC ATAGGCAAGG GAGGCGAACG CAGTGAACTG AAACATCTAA GTAGCTGCAG GAAAAGAAAT CAACCGAGAT TCCCAAAGTA GTGGCGAGCG AAATGGGAAC AGCCTTGTAC TCTTTAGCAG TATTGTTAGC GGAACGGAAT GGAAAGTCCG GCCATAGTGG GTGATAGCCC CGTACGCGAA AACAGTATTG TGGAACTAGG TGTACGACAA GTAGGGCGGG ACACGTGAAA TCCTGTCTGA AGATGGGGGG ACCATCCTCC AAGGCTAAAT ACTCGTGATC GACCGATAGT GAACCAGTAC CGTGAGGGAA AGGCGAAAAG AACCCCGGGA GGGGAGTGAA ATAGATCCTG AAACCGCATG CATACAAACA GTCGGAGCCT GGAAACGGGT GACGGCGTAC CTTTTGTATA ATGGGTCAGC GACTTACATT CAGTGGCAAG CTTAACCGAT TAGGGAAGGC GTAGCGAAAG CGAGTCCGAA TAGGGCGTTC AGTCGCTGGG TGTAGACCCG AAACCAAGTG ATCTATCCAT GGCCAGGTTG AAGGTGCGGT AACACGTACT GGAGGACCGA ACCCACTAAC GTTGAAAAGT TAGGGGATGA GCTGTGGATA GGGGTGAAAG GCTAAACAAA CTTGGAAATA GCTGGTTCTC TCCGAAAACT ATTTAGGTAG TGCCTCGTGT CTCACCTTCG GGGGTAGAGC ACTGTCATGG TTGGGGGGTC TATTGCTGAT TACCCCGCCA TAGCAAACTC CGAATACCGA AGAGTGCAAT CACGGGAGAC AGACATCGGG TGCTAACGTC CGGTGTCAAG AGGGAAACAA CCCAGACCGC CAGCTAAGGT CCCTAAGATT GGCTAAGTGG GAAACGAAGT GGGAAGGCTA AAACAGTCAG GAGGTTGGCT TAGAAGCAGC CACCCTTTAA AGAAAGCGTA ATAGCTCACT GATCGAGTCG TCCTGCGCGG AAGATGTAAC GGGGCTAAGC CAGTCACCGA AGCTGCGGAT GCACGTAAGT GCATGGTAGG AGAGCGTTCT GTAAGCCTGT GAAGGTGTCT TGTAAAGGAT GCTGGAGGTA TCAGAAGTGC GAATGCTGAC ATGAGTAGCG ATAAAGGGGG TGAAAGGCCC CCTCGCCGTA AGCCCAAGGT TTCCTACGCA ACGTTCATCG GCGTAGGGTG AGTCGGCCCC TAAGGCGAGG CAGAGATGCG TAGCTGATGG GAAGCAGGTT AATATTCCTG CACCGTCGTA TGATGCGATG GGGGGACGGA TCGCGGAAGG TTGTCCGGGT GTTGGAAGTC CCGGTCCCTA CATTGGAGAT GGCACTTAGG CAAATCCGGG TGCGTGATTC AAGGGTGTGG GGCGAGCGAC GTTAGGTCGC GAAGCAATTG GAAGTGGTTC CAAGAAAAGC CTCTAAGCTT CAGTCATACG AGACCGTACC GCAAACCGAC ACAGGTGGGC GAGATGAGTA TTCTAAGGCG CTTGAGAGAA CTCGGGAGAA GGAACTCGGC AAATTGGTAC CGTAACTTCG GGATAAGGTA CGCCCTTGTA GTTTGACTGG CTCGCGCCAG AAGGATGAAG GGGTTGCAAT AAAATGGTGG CTGCGACTGT TTAATAAAAA CACAGCACTC TGCAAACACG AAAGTGGACG TATAGGGTGT GACGCCTGCC CGGTGCCGGA AGATTAAATG ATGGGGTGCA AGCTCTTGAT TGAAGTCCCG GTAAACGGCG GCCGTAACTA TAACGGTCCT AAGGTAGCGA AATTCCTTGT CGGGTAAGTT CCGACCTGCA CGAATGGCGT AACGATGGCC ACACTGTCTC CTCCCGAGAC TCAGCGAAGT TGAAGTGTTT GTGATGATGC AATCTCCCCG CGGCTAGACG GAAAGACCCC ATGAACCTTT ACTGTAGCTT TGCATTGGAC TTTGAACCGA TCTGTGTAGG ATAGGTGGGA GGCTTTGAAA CCGGGACGCT AGTTTCGGTG GAGCCGACCT TGAAATACCA CCCTGGTTTG TTTGAGGTTC TAACCTTGGC CCGTGAATCC GGGTCGGGGA CAGTGCATGG TAGGCAGTTT GACTGGGGCG GTCTCCTCCC AAAGTGTAAC GGAGGAGTTC GAAGGTACGC TTGGTACGGT CGGACATCGT ACCTAAAGTG CAATGGCAAA AGCGTGCTTA ACTGCGAGAC CGACAAGTCG AGCAGGTGCG AAAACAGGAC ATAGTGATCC GGTGGTTCTG TATGGAAGGG CCATCGCTCA ACGGATAAAA GGTACTCTGG GGATAACAGG CTGATACCGC CCAAGAGTTC ATATCGACGG CGGTGTTTGG CACCTCGATG TCGGCTCATC TCATCCTGGG GCTGTAGCCG GTCCCAAGGG TATGGCTGTT CGCCATTTAA AGAGGTACGT GAGCTGGGTT TAAAACGTCG TGAGACAGTT TGGTCCCTAT CTGCCGTGGG CGTTGGAATC TTGACGGGGG CTGCTCCTAG TACGAGAGGA CCGGAGTGGA CGTACCGCTG GTGTACCTGT TGTCTCGCCA GAGGCATCGC AGGGTAGCTA TGTACGGAAG AGATAACCGC TGAAAGCATC TAAGCGGGAA ACTCGCCTGA AGATGAGGAT TCCCTGGAGA CTTGATCTCC CTGAAGGGTC GTTCGAGACC AGGACGTTGA TAGGCTGG
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Protein sequence | |
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