Gene WD1143 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagWD1143 
Symbol 
ID2738055 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameWolbachia endosymbiont of Drosophila melanogaster 
KingdomBacteria 
Replicon accessionNC_002978 
Strand- 
Start bp1094461 
End bp1095654 
Gene Length1194 bp 
Protein Length397 aa 
Translation table11 
GC content34% 
IMG OID637173293 
ProductispD/ispF bifunctional enzyme 
Protein accessionNP_966860 
Protein GI42520945 
COG category[I] Lipid transport and metabolism 
COG ID[COG0245] 2C-methyl-D-erythritol 2,4-cyclodiphosphate synthase
[COG1211] 4-diphosphocytidyl-2-methyl-D-erithritol synthase 
TIGRFAM ID[TIGR00151] 2C-methyl-D-erythritol 2,4-cyclodiphosphate synthase
[TIGR00453] 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase 


Plasmid Coverage information

Num covering plasmid clones2 
Plasmid unclonability p-value0.107397 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTGCGCTA AGAAATACAA AATAGCAGCA TTAATAGTTG CAGCGGGAGT AGGCAGTAGA 
TGCAATTCTA CGATTCCTAA GCAATATATA AAACTGGCAG GTAAATCTGT TTTATTTCAT 
ACAATTAAAA GATTTCTGGC TAACCAATAT ATAGATTACA TAAGAATAGC AATTAATAGA 
GACCATGAAA GTTTCTATGA GAAAGCTATA TCACTAATTA CAGACACTAA ATTACTAAGC 
CCTGTATACG GAGGAGAAAA CAGGCAAAGT TCAGTTAAAC TAGGGCTTGA AAGCTTACAA 
AAAATTAACC CAGATTTTGT AGTTATACAC GATGCTTGTA GGCCTTTTGT GTCAGATGTT 
CTGATAGATA ACTTGGTTGA ATCTATGATT AATGATCAAT ATACAGGAGT AGTTCCAGCA 
ATAGAAGTTG AAGACACTAT GTCATTGGTG AGTAATAGTT TTATTGAATC TACGATTTCA 
AGAGGAAAGC TCAGAGCCAT ACAAACCCCT CAAATTTTTA ATTTCAAAGA ATTATTATCA 
TGCCATCAAT CAGTCAAAGA ATTTACTGAC GATTCATCAC TAATGGTAGA GCACAAAAAA 
CATGTTGCGA TTATTAAAGG TGAGAAAAGC AATTTTAAGT TAACCACAAA AGAGGATATC 
AATATGGCAA AGCTTCTTTT TGAAGAGCCA AAATTTCGTG TCGGAGCCGG TTATGATATA 
CATAAGTTCA TTAAAGTTCA AAATGGTGCT GAAAGCTTTA TAAAAATTTG CGGTGTGAAA 
ATTGAACACA ACATGGCAAT AGAAGCGCAC TCTGATGGTG ATGTTGCAAT ACATGCAATC 
GTTGATGCAA TACTCGGAGC ACTGGGATGT GGCGACATAG GAGAGCACTT TCCTCCTAGT 
TCCTCTGAAT GGAAAGATTG CAATTCATCT CACTTTCTTG ACTTTGCTGC TAAAAAAGCA 
AAAGAAAAAG GGTACAGCGT GTCTAATTTA GATATTACTA TAGTTTGTGA AGAGCCTAAA 
ATATCGCCTT ACAAAGTAGA AATGAAGAAA TTCATATCAA AAGCATTAGA AATTGATGAT 
GAATTTGTAA ATATCAAAGC AACCACTGCA GAGAAATTAG GTTATATTGG AAGAAATGAA 
GGAATAGCAG TGCATGCTTC TGTGTTATTG CATACAAACT TTTATTGGAA ATAG
 
Protein sequence
MCAKKYKIAA LIVAAGVGSR CNSTIPKQYI KLAGKSVLFH TIKRFLANQY IDYIRIAINR 
DHESFYEKAI SLITDTKLLS PVYGGENRQS SVKLGLESLQ KINPDFVVIH DACRPFVSDV 
LIDNLVESMI NDQYTGVVPA IEVEDTMSLV SNSFIESTIS RGKLRAIQTP QIFNFKELLS 
CHQSVKEFTD DSSLMVEHKK HVAIIKGEKS NFKLTTKEDI NMAKLLFEEP KFRVGAGYDI 
HKFIKVQNGA ESFIKICGVK IEHNMAIEAH SDGDVAIHAI VDAILGALGC GDIGEHFPPS 
SSEWKDCNSS HFLDFAAKKA KEKGYSVSNL DITIVCEEPK ISPYKVEMKK FISKALEIDD 
EFVNIKATTA EKLGYIGRNE GIAVHASVLL HTNFYWK