| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | WD1064 |
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| Symbol | rpoH |
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| ID | 2738562 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Wolbachia endosymbiont of Drosophila melanogaster |
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| Kingdom | Bacteria |
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| Replicon accession | NC_002978 |
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| Strand | + |
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| Start bp | 1024079 |
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| End bp | 1024972 |
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| Gene Length | 894 bp |
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| Protein Length | 297 aa |
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| Translation table | 11 |
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| GC content | 34% |
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| IMG OID | 637173218 |
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| Product | heat shock sigma factor RpoH |
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| Protein accession | NP_966786 |
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| Protein GI | 42520871 |
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| COG category | [K] Transcription |
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| COG ID | [COG0568] DNA-directed RNA polymerase, sigma subunit (sigma70/sigma32) |
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| TIGRFAM ID | [TIGR02392] alternative sigma factor RpoH
[TIGR02937] RNA polymerase sigma factor, sigma-70 family |
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Plasmid Coverage information |
| Num covering plasmid clones | 2 |
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| Plasmid unclonability p-value | 0.0283902 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTTGACCT CAATGGCAAA CTTATGTGTC GATAGCAGAA CCAATCTCAT GCAATATATT
GCTAGGGTGC AAAAATTTCC TATGCTGTCT CAAGAGGAAG AGGTACGATT AGCAAAAAAT
TGGAACCAAT ATAAGGATGT TTCTTCTGCT CATAAATTGA TTACCAGCCA TTTGAATTTG
GTAGTGAAAA TTGCAATGAA ATTCAAAAAT TATGGGCTAT TGTTGATGGA CCTGGTTATG
GAAGGAAATA TGGGTTTAAT GCACGCAGTG AAAAAGTTTA ATCCTGATTT AGGGTTTCGT
TTTTCAACTT ATGCAGTGTG GTGGATTGAA GCTTCAATAA AAGACTTTAT ATTGAAATCT
TGGTCGTTTG TGAAAATAGG CACAACGCAA GCACAAAGAA GATTGTTTTT TAGTTTACGT
AAAATAAAAA AAAGAATTTT ACAGTATACA AACAGGGAAA CTTTAAATAA TGAAGAAATA
AAAGCAATAT CTAATGAGCT TTCTGTATCC GAAGGAGACG TTCTGCAGAT GAATTACCGT
ATGGCTTGTA AGGATCAGTC GTTAAACGAT TGCATAAAAA TAGGTGATGA CTCTAAAAGG
GAGTTGCAAG ATATGATCCC ATGTAACTTG GTCAGTCAAG AAGTAACCTA TCAGAATCAT
GAAGAAAAAG AATTAAAAGA AACAATTTTA AACAATGCAC TAGCGAGTCT CAACGAAAGG
GCAAGAGACA TTTTTATCAG TAGATATTTG TCTGAAAACA TTCAAACTCT GGATGAACTT
AGTAAAAAAT ATTGTGTTTC AAGAGAAAGA ATAAGGCAGT TGGCTGAGCA GGCGATGGCT
AAGGTAAAAC AATATATACA ATCTGAAAGT TTGAAATTTG GTTTGCATGC GTAG
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| Protein sequence | MLTSMANLCV DSRTNLMQYI ARVQKFPMLS QEEEVRLAKN WNQYKDVSSA HKLITSHLNL
VVKIAMKFKN YGLLLMDLVM EGNMGLMHAV KKFNPDLGFR FSTYAVWWIE ASIKDFILKS
WSFVKIGTTQ AQRRLFFSLR KIKKRILQYT NRETLNNEEI KAISNELSVS EGDVLQMNYR
MACKDQSLND CIKIGDDSKR ELQDMIPCNL VSQEVTYQNH EEKELKETIL NNALASLNER
ARDIFISRYL SENIQTLDEL SKKYCVSRER IRQLAEQAMA KVKQYIQSES LKFGLHA
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