Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | WD1042 |
Symbol | |
ID | 2738785 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Wolbachia endosymbiont of Drosophila melanogaster |
Kingdom | Bacteria |
Replicon accession | NC_002978 |
Strand | + |
Start bp | 1004185 |
End bp | 1005081 |
Gene Length | 897 bp |
Protein Length | 298 aa |
Translation table | 11 |
GC content | 35% |
IMG OID | 637173197 |
Product | cation efflux family protein |
Protein accession | NP_966765 |
Protein GI | 42520850 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG1230] Co/Zn/Cd efflux system component |
TIGRFAM ID | [TIGR01297] cation diffusion facilitator family transporter |
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Plasmid Coverage information |
Num covering plasmid clones | 3 |
Plasmid unclonability p-value | 0.0815398 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGACAGCAG TGCATAACGG TAAACACTCA GCAGCGCAGT CCAAGCGCTT AATCTATTCC ATAATAATAG TTGCGATAAC AATGTTTATG GAAATAGTAG GTGGAATAAT TTCACATTCG CTTGCTCTAT TATCAGATGC AGGGCATATG CTCACTGACC TCTTTGCCTT GGTTTTAAGC TGGTTAGCAC ATAGGTTTTC AGCTAAGAAA TCCGATTTGC AGAGATCATA CGGATATCAT CGGTTGCAGA TAATTGCAGC ATTTGTTAAT GGTTTAACTC TATTCCTCAT TGCAGTAATC ATTATAATTG AGTCAATAAA GAGGTTTATT TTTCCAGTCA ATGTTGAGTG GAAAGTAATG TTAATAATTG CTACACTCGG TCTTGTCTCT AACATAATAG TCTTTTTTAT ATTACATAGT AAATGCGAGA GCAATATAAA CATAAAAAGT GCTGTACTAC ACGTTATAGG AGATATTTTA GGTTCTGTAG CTGCTATACT TGCATCTATA ATTATCATGC TTACTGGATG GCAAATAGTA GATCCAATCT TATCAGTATT TGTTAGTGTG GTAATTCTAA ATAGCGGCTA TAAAATTCTC AAAAATTCTT GCCATATACT CCTTGAAGGT ACGCCTGAGG GTATATCTGC TGAAGAGATA AAAAGTAAGA TCACATCAGA ATTACCTGAA GTGATAGATG TGCACCACAT ACATACATGG TCGCTGTCTG ATAATTATTT TATAATTACC ATGCATGCTA AAATAAAGCA AAATGTGCAG CACACCAATG TTTTATATGA AATAAAAAAA ATATTGCTAG ATAAGTTCGA GATAGCACAC TCTACAGTCG AGATCGAATA CGATGAGTGT GCGGATAATA AGATACTTAA ACATTGA
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Protein sequence | MTAVHNGKHS AAQSKRLIYS IIIVAITMFM EIVGGIISHS LALLSDAGHM LTDLFALVLS WLAHRFSAKK SDLQRSYGYH RLQIIAAFVN GLTLFLIAVI IIIESIKRFI FPVNVEWKVM LIIATLGLVS NIIVFFILHS KCESNINIKS AVLHVIGDIL GSVAAILASI IIMLTGWQIV DPILSVFVSV VILNSGYKIL KNSCHILLEG TPEGISAEEI KSKITSELPE VIDVHHIHTW SLSDNYFIIT MHAKIKQNVQ HTNVLYEIKK ILLDKFEIAH STVEIEYDEC ADNKILKH
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