Gene WD0776 details

Gene Information

• Locus tag: WD0776
• Symbol: ligA
• ID: 2737976
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Wolbachia endosymbiont of Drosophila melanogaster
• Kingdom: Bacteria
• Replicon accession: NC_002978
• Strand: -
• Start bp: 749026
• End bp: 751014
• Gene Length: 1989 bp
• Protein Length: 662 aa
• Translation table: 11
• GC content: 36%
• IMG OID: 637172952
• Product: DNA ligase, NAD-dependent
• Protein accession: NP_966531
• Protein GI: 42520616
• COG category: [L] Replication, recombination and repair
• COG ID: [COG0272] NAD-dependent DNA ligase (contains BRCT domain type II)
• TIGRFAM ID: [TIGR00575] DNA ligase, NAD-dependent

Plasmid Coverage information

• Num covering plasmid clones: 3
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGACTAACT TAGAAAAGAT GAGAGAAAAA CTGCAAGATC AAATAAATTA TCATAATGTT 
TTGTATCACC AAAAAAATAA GCCAGAAATA AGTGATGCTG AATATGATGA ACTGAAGAAA 
AAGTTAGCTG AAATAGAGCC AGAAATTTAT GCAACACAAG ATAGTGTTGG TGCTCCACCT 
GATGAGAGGT TTTCTAAGGT GGAACATCAA GAACCTATGC TTTCCCTTGA GAATGCTTAT 
GATGAACAAG GTGTAGAGAA ATTTTTGTCT AAAATAAAGA GGTTTTTAAT TGAGGACAAA 
ATAGAGATAT TATGTGAACC AAAAATTGAT GGGTTGTCGT TTTCTGCAAT TTATGAGGAT 
GGAAGATTTG TTAAAGCTGC AACTCGAGGT GATGGTTTTG TAGGGGAAGA TGTCACTCAC 
AATGTTGCAA CAATAAAAGG CTTTCCTAAG TTTTTGCAAG GTGTGCAAGG AAGACTAGAA 
GTAAGAGGTG AAATATACAT CAGTAACAGC GACTTTTTAA AGTTAAATGA AAACGATGAA 
TTTGCCAATC CTCGAAATGC AGCCGCTGGT TCTCTAAAGC AATTGGATGC AAACATTACA 
GCAAGCAGAC CTCTTAGATA TTTTGCTTAT TCTTTGATTG GTGGAGCAGA GAAAAGTCAA 
AGTGAGGTAC TAAATAAGCT TGAGGCACTT GGTTTTTGCG TAAATGAGCA TCAGTCCTTA 
ACGAGTAGTT TAGATGGAAT GCTGAAGTTC TATAATGAAG TCTATAACTG TCGCTATAAC 
TTGGATTATG ATATTGATGG AATAGTCTAT AAAGTAAATG ATTTGGTACT ACAAAATCGT 
CTAGGGAATA CTCACAAAGC ACCGCGCTCA GCACTTGCAT ACAAGTTTTC TGCGGTTTAT 
GCAAAAACAA AGTTAAACAA GATATTTATA CAGGTGGGCA GAACAGGGGT TTTAACTCCA 
GTTGCAGATT TAGTGCCAGT CAATGTTGGT GGGGTGCTAG TTAGTAGAGC AAGTCTGCAT 
AACCAAGATG AGATAAAACG TAAAGATATA AGAGAGGGAG ATATTGTAAC AATCAAAAGG 
GCAGGTGATG TAATTCCCCA GATCGTTGAA GTAAGCAGAG ATTCTCGTCT TCCAAATACA 
CCTGAATTTG TGTTTCCTGA AGTATGCCCT GAATGTGGTA GTAAAGTACG TCAGGTTGAG 
GGAGAGGCAG CAGTAAGATG TCCTGAGGAA TTTGCCTGTA AAGCTCAAAT GATAGAAAAA 
CTAAAGCATT TTGTATCGAA AGATGCATTT GACATTGTTG GCCTTGGTGA TAAGCAGATA 
GAGTTTTTTT ACGACCTTGG TCTGATAAAA CAAATCCATG ATATTTTTAC TTTAGAAGAA 
AGATTGGATG AATTTAATCT GGAAGAACAG TCTGGTTGGG GCGAGAAATC TATAGCTAAT 
TTGTTAAATT CTATACAAAG CAGAAGGGTA ATAACTCTAG ATAGGTTTAT ATTTTCTTTA 
GGTATTAGAT TTATTGGCCA AGTTGCAGCA GAATTGCTTG CAGATTATTA TGTTTCTTAT 
AATAACTGGT ATAATTCGAT GATTGAACTG TCATTAGATA ATACTGAGCT AGTAGGTATA 
GATGGCATAG GAAAAAAAGG GGCTGAATCT TTGGAATCAT TTTTTTCTAA GGAACATAAC 
ATCAAAATGT TAAATGATCT TACTGCTTGT CTTCAAATTC TTCCTGTGAG CTCCAACTCT 
AGTAACTCTG TTTTAAATAA TAAAATTATA GTGTTTACTG GTAAGCTACT TGCTATGAGT 
AGAGGAGAGG CAAAAGTAAG AGCCAAAACT CTGGGAGCAA AGGTCAGCTC ACATCTTTCT 
GCTAAAACTG ACTACCTAAT TGCAGGAGAA AAACCAGGAT CCAAATATAA AAAGGCAGTG 
GAATTAGGTG TAGAAATTTT AGATGAAGAC CAGTGGCATA AAGTGATAAG TTTGGGAGTG 
TTCAAATGA 

 

Protein sequence

MTNLEKMREK LQDQINYHNV LYHQKNKPEI SDAEYDELKK KLAEIEPEIY ATQDSVGAPP 
DERFSKVEHQ EPMLSLENAY DEQGVEKFLS KIKRFLIEDK IEILCEPKID GLSFSAIYED 
GRFVKAATRG DGFVGEDVTH NVATIKGFPK FLQGVQGRLE VRGEIYISNS DFLKLNENDE 
FANPRNAAAG SLKQLDANIT ASRPLRYFAY SLIGGAEKSQ SEVLNKLEAL GFCVNEHQSL 
TSSLDGMLKF YNEVYNCRYN LDYDIDGIVY KVNDLVLQNR LGNTHKAPRS ALAYKFSAVY 
AKTKLNKIFI QVGRTGVLTP VADLVPVNVG GVLVSRASLH NQDEIKRKDI REGDIVTIKR 
AGDVIPQIVE VSRDSRLPNT PEFVFPEVCP ECGSKVRQVE GEAAVRCPEE FACKAQMIEK 
LKHFVSKDAF DIVGLGDKQI EFFYDLGLIK QIHDIFTLEE RLDEFNLEEQ SGWGEKSIAN 
LLNSIQSRRV ITLDRFIFSL GIRFIGQVAA ELLADYYVSY NNWYNSMIEL SLDNTELVGI 
DGIGKKGAES LESFFSKEHN IKMLNDLTAC LQILPVSSNS SNSVLNNKII VFTGKLLAMS 
RGEAKVRAKT LGAKVSSHLS AKTDYLIAGE KPGSKYKKAV ELGVEILDED QWHKVISLGV 
FK