Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | WD0710 |
Symbol | ribD |
ID | 2738167 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Wolbachia endosymbiont of Drosophila melanogaster |
Kingdom | Bacteria |
Replicon accession | NC_002978 |
Strand | + |
Start bp | 684450 |
End bp | 685532 |
Gene Length | 1083 bp |
Protein Length | 360 aa |
Translation table | 11 |
GC content | 37% |
IMG OID | 637172889 |
Product | riboflavin biosynthesis protein RibD |
Protein accession | NP_966470 |
Protein GI | 42520555 |
COG category | [H] Coenzyme transport and metabolism |
COG ID | [COG0117] Pyrimidine deaminase [COG1985] Pyrimidine reductase, riboflavin biosynthesis |
TIGRFAM ID | [TIGR00227] riboflavin-specific deaminase C-terminal domain [TIGR00326] riboflavin biosynthesis protein RibD |
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Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGACTGATG ATCATTTCAT GTCAATTGCA TTAAGGCTTG CAGAAAAAAA TCTTGGAAAT GTTGCACCAA ATCCTGCTGT CGGGTGTATT ATTGTAAAGG ATGGTACAAT TGTTAGTGAG GGATACACAG GGATTGGTGG GCGTCCGCAT GCGGAGGTAG TCGCTTTGCA AAACGCTAAA GATTCAACTC ATGGCGCAAC TATATATATC ACTCTTGAGC CATGTTGTCA TCATGGAGTC ACGGGGCCTT GCACTGCAAA AATCATAAAA GCTAGCATAA AAAGAGTAGT AATTGCAACT ATTGACCCAG ATAGTAGAGT TTCAGGCAGA GGCATGAAAG CTCTGAAAGA AGCAGGAATT GAAGTTGAGC AAGGTATTAT GCAAAAAGAG GCAAAAGAAC TGAATGTCGG TTTTTTCACC ACTAAAGAAT TACATAGACC ATTTATAGCT TGCAAAGTCG CAACAACTCT TGACGGAAAA ATCGCAACAT TTACAGGCGA TAGCAAATGG ATAACAAGTG AAAATACGAG AAACTGGGTG CATGAGCTCA GAACGAAATA TGATGCAATT ATGATTGGCA GCAATACTCT TATTAATGAT GATCCACTCT TAACTTGCAG ATTACCAGGA CTCGGAAGTA GATCGCCAAT AAGGCTAATT ATAGATAGTC AAGGGAGATT AAAGGAAGAG CATAACATTG CAAAGACTGC AGACAAAGTA ATAACTTGGG TCATCACAAA TAAAGAAGTA GAGAAAAAAA TAAAAAACAT TAACTACTTA GTAGTTAATT CAAGCAACGC AGGTAAGGTT TGCCTAAAGG ACATGGCATT AAAACTTGTT TCAGAAATTG GTATAACAAG ATTATTAGTT GAAGGTGGAG GAGTGTTAAT CACAGAACTA TTAAAGTGTA ATTTAATCGA CAGGTTGATA ATATGCCGCA GTGGTAAAAT TTTAGGCAAT GATGCCACTC CTTTTGTAGG AGATTTAGGG ATTCAATTCA TTAACAACTG TTATCAGTTT AAAAAAACAA AGATAATAGA GTTTAGTGAG GATATAGTTG AGGTTTGGGA TAGGTCGTCA TAA
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Protein sequence | MTDDHFMSIA LRLAEKNLGN VAPNPAVGCI IVKDGTIVSE GYTGIGGRPH AEVVALQNAK DSTHGATIYI TLEPCCHHGV TGPCTAKIIK ASIKRVVIAT IDPDSRVSGR GMKALKEAGI EVEQGIMQKE AKELNVGFFT TKELHRPFIA CKVATTLDGK IATFTGDSKW ITSENTRNWV HELRTKYDAI MIGSNTLIND DPLLTCRLPG LGSRSPIRLI IDSQGRLKEE HNIAKTADKV ITWVITNKEV EKKIKNINYL VVNSSNAGKV CLKDMALKLV SEIGITRLLV EGGGVLITEL LKCNLIDRLI ICRSGKILGN DATPFVGDLG IQFINNCYQF KKTKIIEFSE DIVEVWDRSS
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