| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | WD0413 |
|---|
| Symbol | aspS |
|---|
| ID | 2738907 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Wolbachia endosymbiont of Drosophila melanogaster |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_002978 |
|---|
| Strand | + |
|---|
| Start bp | 389857 |
|---|
| End bp | 391659 |
|---|
| Gene Length | 1803 bp |
|---|
| Protein Length | 600 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 39% |
|---|
| IMG OID | 637172618 |
|---|
| Product | aspartyl-tRNA synthetase |
|---|
| Protein accession | NP_966203 |
|---|
| Protein GI | 42520288 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG0173] Aspartyl-tRNA synthetase |
|---|
| TIGRFAM ID | [TIGR00459] aspartyl-tRNA synthetase, bacterial type |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 7 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAACTGCT ACAAGACTCA CACGTGTGAA GAATTAAGAA AGAATGATGT AGAAAAGGAA
GTTACCCTTT CTGGATGGTT ATATCGTAAG CGCGACCATG GTAACCTAAT TTTTGTTGAT
TTAAGAGACT TCTACGGAAT CACTCAGCTA GTATTTAATA ATGACAAAGA CTTTTTTGAT
GAGATATCAA ATTTAAAATT GGAGAGTGTA ATTACTGTTA CAGGAATAGT TGAAGCTAGA
ACTGAAGATA CGGTAAACAG CTCTATTTCT ACCGGAGAAA TCGAGGTGAT AGTCAACAAT
TTGCGCGTTG AGTCGGAAGT TGAGTTCCAC TTTGATGAAG AAATAGCAAA AGAAGAAAGA
AGTATATTGG TAAGCATTAC CGGCGAGCAA GAATACCCAG AAAACATGAG ATTTAAATAT
CGATTTCTTG ACTTAAGACG TGAAAAAGTC CGCAACAATA TTATTTTGCG CTCACAAATT
ATTGCAGAGC TCCGCAAGCT CATGATAGAG CGAGGATTTT TAGAGATTCA AACTCCAATA
CTCACTGCTT CCTCTCCTGA AGGAGCACGC GACTACCTAG TGCCAAGCAG GCTAAATCCT
GGCAAGTTCT ATGCATTGCC ACAAGCTCCG CAGATTTTCA AACAGTTGCT CATGGTTTCA
GGGTTTGATA AATATTTCCA AATTGCACCG TGTTTTCGTG ATGAAGACGC AAGGGCTGAC
CGTTCTCCGG GAGAGTTTTA TCAGCTAGAT CTTGAAATGT CTTTTGTAAC TCAAGAAGAC
ATCTTTCAGA TTATTGAGTC TACCTTATAT AGAGTGTTTG CTAAATTTTC TCGCAAGTCT
GTCGATAAAG ATTTTCCACG CATTACATAC AAAGAGGCAA TGCTTAAGTA TGGTTCTGAC
AAGCCAGATT TGCGTAATCC ACTATTAATC AGCGATGTTA CAGAAATTTT TCGTGATTCA
GGGTTCAATA TTTTCAAAAG CAATATTGAG CGTGGTATGG TAGTGAGAGC CATCCCTGCA
CCTAAAACAG CAGAGGAACC ACGCAGCTTC TTTGATAAAA AGATAGAACA TGCGCAAAAA
GAATTCGGTG CTAAGGGTCT CGGATATATA ACGTTTGATA AAGATGGAAC TGCGAAAGGC
CCAATTGCTA AATTTCTTGA TGAAAATAGG CTAAACCACA TAAGAGAAGC AACAAACATA
GAGCCAGGAG ATAGTGTATT TTTTGCTTCT GACAAAGAGA ATGAGGCGGC AAACATTGCA
GGAAAAGTAC GCACTCTTTT AGGGTCAGAA CTCAGTCTTA TAGATGATAA TATCTTCAGG
TTTTGTTGGA TCATTGATTT TCCATATTTT GTATATGACG ATAAAAGTAA AAAAATCGAT
TTCTTTCATA ACCCATTCTC CATGCCACAC GGTGGTCTGA AAGATTTAGA GGACAAAAAT
CCACTGGATA TCCTTGCTTA CCAATATGAT CTTGTTTGCA ATGGAATAGA ACTGTCAAGT
GGGGCGATTC GTAATAACAA ACTGGATATC ATGTATAAAG CTTTTGCCAT TGCAGGTTAT
AGCCGGGGAG AAGTTGATAC AAGATTCGGT GCACTTGTAC GTGCATTCAG ATTTGGTGTT
CCTCCTCATG GTGGAATAGC ACCAGGAGTT GATAGAATAG TTATGCTGCT TGCTGATGAG
CCAAATATTC GTGAAGTAAT CTGTTTTCCT ATGAACCAGC AAGGTGAAGA TGTTCTAATG
GGTGCTCCTT CCAAGGTGGA GGATAAGCAT TTACGTGAAT TATCCTTGAA GGTTATTGAA
TGA
|
|---|
| Protein sequence | MNCYKTHTCE ELRKNDVEKE VTLSGWLYRK RDHGNLIFVD LRDFYGITQL VFNNDKDFFD
EISNLKLESV ITVTGIVEAR TEDTVNSSIS TGEIEVIVNN LRVESEVEFH FDEEIAKEER
SILVSITGEQ EYPENMRFKY RFLDLRREKV RNNIILRSQI IAELRKLMIE RGFLEIQTPI
LTASSPEGAR DYLVPSRLNP GKFYALPQAP QIFKQLLMVS GFDKYFQIAP CFRDEDARAD
RSPGEFYQLD LEMSFVTQED IFQIIESTLY RVFAKFSRKS VDKDFPRITY KEAMLKYGSD
KPDLRNPLLI SDVTEIFRDS GFNIFKSNIE RGMVVRAIPA PKTAEEPRSF FDKKIEHAQK
EFGAKGLGYI TFDKDGTAKG PIAKFLDENR LNHIREATNI EPGDSVFFAS DKENEAANIA
GKVRTLLGSE LSLIDDNIFR FCWIIDFPYF VYDDKSKKID FFHNPFSMPH GGLKDLEDKN
PLDILAYQYD LVCNGIELSS GAIRNNKLDI MYKAFAIAGY SRGEVDTRFG ALVRAFRFGV
PPHGGIAPGV DRIVMLLADE PNIREVICFP MNQQGEDVLM GAPSKVEDKH LRELSLKVIE
|
|---|
| |