Gene WD0247 details

Gene Information

• Locus tag: WD0247
• Symbol: prfA
• ID: 2738735
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Wolbachia endosymbiont of Drosophila melanogaster
• Kingdom: Bacteria
• Replicon accession: NC_002978
• Strand: +
• Start bp: 231348
• End bp: 232427
• Gene Length: 1080 bp
• Protein Length: 359 aa
• Translation table: 11
• GC content: 36%
• IMG OID: 637172468
• Product: peptide chain release factor 1
• Protein accession: NP_966056
• Protein GI: 42520141
• COG category: [J] Translation, ribosomal structure and biogenesis
• COG ID: [COG0216] Protein chain release factor A
• TIGRFAM ID: [TIGR00019] peptide chain release factor 1

Plasmid Coverage information

• Num covering plasmid clones: 5
• Plasmid unclonability p-value: 0.736319
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGGATATGG AAAATAATTT ACAAGACTTA AAGAAAAAAT TTAATGATAT AGAGAGGAAT 
TTGGAAAATC CTACCAATTT AAGTCAAAAA GAATTCATTA CCCTTTCAAA GGAATACTCT 
GAGCTCAGGC CAATAATCAA GATAATTGAT GAATATAACA CGCTGAAAGA GGAAATTTCA 
GACTTAGAAG AAATAATGAA AGATGAAAAC AGCGAAGGTG ATATAAAAGA GTTAGCAAAA 
GAAGAATTTT TCGAAAAGCA CAAGGTATTA TTACCAAAAA TAAAAGCAAA ATTAAAGTTA 
GCATTATTGC CCAAAGATGA AGATGACTCA AGAAATGCAA TATTAGAAAT TAGAGCAGGT 
ACAGGCGGAG AAGAAGCAGC ATTATTTGCA GCAATGTTAT TTCGTATGTA TCAAAAATAT 
GCAGAAAGAA GAAATTGGAA GTTCGAGCCA ATAAGCATTT CTAATACAGG TATAGGTGGA 
TATAAGGAAG CTTCTGCACT CATTAATGGA ACAGAAGTTT TTGCAAGGTT GAAATTTGAA 
TCAGGAGTGC ACAGAGTACA GAGAGTGCCA GAAACTGAAT CTTCAGGAAG GTTGCATACC 
TCTGCCGCTA CTGTTGCGAT ATTACCTGAA GTAGAAGAAG TTGACTTTAA AATAGAAGAA 
AAAGACTTAC GAATAGATGT TTATAGATCC AGTGGTCCTG GAGGGCAATC AGTGAATACA 
ACTGACAGCG CAGTAAGGGT CACCCACTTG CCAACAGGGA TAGTTGTGAT ACAGCAAGAT 
GAAAAATCGC AGCATAAAAA TAAAGCTAAA GCGCTCAAAG TATTGAGGGC AAGGCTATAC 
GAAATTGAAA GACAAAAAAA AGAAATGGAA AGGTCAACAA TGAGGAAAAG TCAGATTGGC 
TCTGGTGATC GTTCCGAGCG CATAAGAACA TATAATTTCC CACAATCAAG AATAACAGAC 
CACAGAATTA ATCTAACTTC ACATCGGCTA GAGCAGATTA TAAAAGAAGG CGAACTAGAT 
GAATTTATTG AGGCATTAAT CTCACGTAAT GAAGCAGAAA GATTGGCAGG GGAAAGTTAG 

 

Protein sequence

MDMENNLQDL KKKFNDIERN LENPTNLSQK EFITLSKEYS ELRPIIKIID EYNTLKEEIS 
DLEEIMKDEN SEGDIKELAK EEFFEKHKVL LPKIKAKLKL ALLPKDEDDS RNAILEIRAG 
TGGEEAALFA AMLFRMYQKY AERRNWKFEP ISISNTGIGG YKEASALING TEVFARLKFE 
SGVHRVQRVP ETESSGRLHT SAATVAILPE VEEVDFKIEE KDLRIDVYRS SGPGGQSVNT 
TDSAVRVTHL PTGIVVIQQD EKSQHKNKAK ALKVLRARLY EIERQKKEME RSTMRKSQIG 
SGDRSERIRT YNFPQSRITD HRINLTSHRL EQIIKEGELD EFIEALISRN EAERLAGES