Gene WD0165 details

Gene Information

• Locus tag: WD0165
• Symbol: def
• ID: 2738598
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Wolbachia endosymbiont of Drosophila melanogaster
• Kingdom: Bacteria
• Replicon accession: NC_002978
• Strand: -
• Start bp: 152607
• End bp: 153146
• Gene Length: 540 bp
• Protein Length: 179 aa
• Translation table: 11
• GC content: 34%
• IMG OID: 637172392
• Product: peptide deformylase
• Protein accession: NP_965982
• Protein GI: 42520067
• COG category: [J] Translation, ribosomal structure and biogenesis
• COG ID: [COG0242] N-formylmethionyl-tRNA deformylase
• TIGRFAM ID: [TIGR00079] peptide deformylase

Plasmid Coverage information

• Num covering plasmid clones: 11
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGTCCATAT TACCAATTGT AATTGCCCCT GATGAAAGAC TAATCACACG TGCCAGTGAA 
GTAACAGATA TAAACGATAA AATTAAAGAA TTAGTAAACG ACATGTTCGA AACTATGTAT 
GATGCAGAAG GTCTTGGCCT TGCTGCAGTG CAAGTTGGAG TGTTAAAGAG AATTTTTGTT 
ATGGATATTC AGCTAGAAAC GATTGAAAAT GAGCCAGCAG GATATGGCTC AACTGGCAAA 
TTTTACATGA TTAATCCTGA GATTACAGAA TTATCCGATG AACAAGTAAT TCTCAAGGAA 
GGATGCCTTT CAATTCCAGA GCAAAGTCAT GAAATTAAGC GTCCAAAGTA TCTAACTGTA 
AAATATAAAG ACTTAGATAA TGAAGAACAA ACACTAAAAG CTAGTGGTTG GCTTGCAAGG 
TGTATTCAGC ATGAATTAGA TCACTTAAAC GGCATATTAT ATATTAGACA TTTATCTAAA 
TTAAAGTATG ATATGGCCAT GAAAAAAGCA CAAAAGGTTA AAAAGCATTA TGAGCAATAA 

 

Protein sequence

MSILPIVIAP DERLITRASE VTDINDKIKE LVNDMFETMY DAEGLGLAAV QVGVLKRIFV 
MDIQLETIEN EPAGYGSTGK FYMINPEITE LSDEQVILKE GCLSIPEQSH EIKRPKYLTV 
KYKDLDNEEQ TLKASGWLAR CIQHELDHLN GILYIRHLSK LKYDMAMKKA QKVKKHYEQ