| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | WD0086 |
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| Symbol | secD |
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| ID | 2738020 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Wolbachia endosymbiont of Drosophila melanogaster |
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| Kingdom | Bacteria |
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| Replicon accession | NC_002978 |
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| Strand | - |
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| Start bp | 78664 |
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| End bp | 80169 |
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| Gene Length | 1506 bp |
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| Protein Length | 501 aa |
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| Translation table | 11 |
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| GC content | 35% |
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| IMG OID | 637172319 |
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| Product | preprotein translocase subunit SecD |
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| Protein accession | NP_965912 |
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| Protein GI | 42519997 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG0342] Preprotein translocase subunit SecD |
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| TIGRFAM ID | [TIGR00916] protein-export membrane protein, SecD/SecF family
[TIGR01129] protein-export membrane protein SecD |
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Plasmid Coverage information |
| Num covering plasmid clones | 3 |
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| Plasmid unclonability p-value | 0.509625 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTATAACA GACTTATAGT CAAATCTTTT TCAGTATTAT GCATCTGTTT ATTTGCTTTA
TACATAACAC TGCCAAATTT CTTTGATAAT AAGCTTTTTA TTTCGAAAAA AAGAATAAAC
TTAGGCCTTG ACCTGAAAGG AGGGGCATCT TTGCTTTTAA ACATAGACTT AGACTTCTAT
TTTAAGGAAA AGCTAAGCAT GCTAGCTAAC GAAATAAAAG AGACATTGCT AACAAAAAAT
ATTGAATCTA ACGTACAAAA TAGCGTTATA ACTTTAAATA GTATTGATGA TTATAAAAAA
GCATCTGTGT TGATTAATAC GATAAATCCA AATTTAGAGC TAAATAGAAA AGATTCTTCG
ATTCTCATTT CGTATAAACC ACATTATAAA AATTCTTTGA TCAGTGAAGT AGCTGCAGAA
TCAATAAACA ATGTCCAGCG CCGTTTGGAC AAACTTGGCA CAAAGGAAGT CAGCGTTCAA
AAACAAGGGC AGAATAAAAT ATTAGTGCAG GTGCCTGGAG TAGAAGATAC CAAGCAGATA
AAATCTCTGC TTGGCAAAAC TGCTAAGCTA GCTTTTCATT TGGCAAACAC TAACATAGCC
AAGGTGCAGG ATATAGACCA TGAAACCACT GTCATGCTCA AGGATTCTTT AGGTAATTCT
TATCCAATAT TCCGCAAAAC TGAAATAGGT GGTGATTCGC TGGTTAACGC ATCAGTTAGA
TTCGGCAATT TAGGTAAACC GACAGTGCAT TTTAAATTTG ACAGTATAGC GAGTAAAAGA
TTCGCGAAAA TCACTAAAGA AAATGTAGGA AAGCCTTTTG CAATTGTTCT GGATAACACA
GTTTTAACAG TACCTACAAT ACGTGAGCCA ATTTTAAATG GAGAGGGAGA AATTAGCGGT
AATTTCACTG AAAAACAAGC AAGCGAACTT GCAATACTTT TAAAATCTGG AGCACTGCCA
GCACCACTTA AAATAATTGA AGAAAAAAAC ATTGGCCCAA GTCTTGGAGA AGAATCAATA
AAGGCAGGGG AAATGGCAGC AACAATCTCT ATTATAGCAG TGGCTTTATT TATAATCATC
ACTTACGGCA AATTAGGTGT ATTGGCCTCT GTTGCACTTT TTTCTAATGT AGTTCTTATA
TTATCAATTC TCACTCTGCT TGAAGCAACT CTAACTTTAC CTGGAATTGC CGGTATTGCA
CTTACTGTTG GTATGGCGGT GGATGCAAAT GTTTTAATAT TTGAGCGAAT TCGTGAGGAA
ATCAAATCTG GCAAGAGAGT GGAACGTGCT ATTGAAGAAG GGTTTAAAAA CGCTATAAAG
ACAATACTGG ATTCAAATAT CACTACATTA ATTGCTGCAG GAATAATGTT CATTATTGGC
AGTGGAGCAA TAAGAGGCTT TTCTGTCACT CTATCAATAG GAATTTTATG TTCGATGTTT
TCTGCAATCA CAGTCACAAA ACTCCTGATA GAGTTGTGTA TGAACCCGAA GGAACTAGCG
CTTTGA
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| Protein sequence | MYNRLIVKSF SVLCICLFAL YITLPNFFDN KLFISKKRIN LGLDLKGGAS LLLNIDLDFY
FKEKLSMLAN EIKETLLTKN IESNVQNSVI TLNSIDDYKK ASVLINTINP NLELNRKDSS
ILISYKPHYK NSLISEVAAE SINNVQRRLD KLGTKEVSVQ KQGQNKILVQ VPGVEDTKQI
KSLLGKTAKL AFHLANTNIA KVQDIDHETT VMLKDSLGNS YPIFRKTEIG GDSLVNASVR
FGNLGKPTVH FKFDSIASKR FAKITKENVG KPFAIVLDNT VLTVPTIREP ILNGEGEISG
NFTEKQASEL AILLKSGALP APLKIIEEKN IGPSLGEESI KAGEMAATIS IIAVALFIII
TYGKLGVLAS VALFSNVVLI LSILTLLEAT LTLPGIAGIA LTVGMAVDAN VLIFERIREE
IKSGKRVERA IEEGFKNAIK TILDSNITTL IAAGIMFIIG SGAIRGFSVT LSIGILCSMF
SAITVTKLLI ELCMNPKELA L
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