Gene WD0025 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagWD0025 
Symbol 
ID2737932 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameWolbachia endosymbiont of Drosophila melanogaster 
KingdomBacteria 
Replicon accessionNC_002978 
Strand
Start bp29213 
End bp30175 
Gene Length963 bp 
Protein Length320 aa 
Translation table11 
GC content41% 
IMG OID637172264 
ProductNifR3 family protein 
Protein accessionNP_965858 
Protein GI42519943 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0042] tRNA-dihydrouridine synthase 
TIGRFAM ID[TIGR00742] tRNA dihydrouridine synthase A
[TIGR00737] putative TIM-barrel protein, nifR3 family 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCCCCTCC AAATAGGAAA TTTGACAATT GATTCTCCAG TTATTTTAGC TCCAATGTCT 
GGAGTGACTG ATTATCCGTT TAGAAGTATT GTGAAGAAAC TTGGTGCAAG TTTGTTAGTT
TCAGAGATGA TCGCAAGCAG AGCTATGATT ATGCAAACTC GCCAGAGTTT GCAAAAAGCA
AAAGTCGATG CATTAACTGC TGTGCAGCTT GCTGGGTGTG AGCCAGATGT TATGGCGGAG
GCTGCAAAAT TAAACGAGGA CATGGGAGCA AAAATTATAG ACATAAACTT TGGTTGCCCT
GTTAAAAAAG TTGTAAACGG TTATGCAGGA TCAGCGCTAA TGCGTGATGA GAAAAAAGCC
GCTGAGATAA TTGAAGCTGT GGTCAAAGCA GTGAATATGC CAGTTACGGT AAAAATGCGC
ACTGGATGGA ACGATGAAAA TCGCAATGCC CCGAGACTTG CGAAAATTGC CGAAGACTTA
GGAGCAAAAA TGATCACTGT GCATGGAAGA ACAAGAGCGC AGCTTTATAA TGGTCAAGCA
GATTGGAAAT TCGTTAGAAA TGTTAAAGAG CAAGTGAAAA TTCCAGTTAT AGTAAATGGC
GATATTAAAA ATTTAAATGA TATTCAGAAT GCTCTCAAAG AATCTGGAGC AGACGGAGTG
ATGATAGGTC GTGGTGCCTA CGGTAAACCT TGGCTGATTA ATCAAGCAAT GAACTTTCTC
AGTGGAAGTG AAACTTCTGA GCCAACAGCT TCAGAGAGAT TAAGCATCAT ACTCGAGCAT
TACGACAATA TTCTTGAGTA CTATGGAAAT GACACAGGAA TAAAGATGGC CCGCAAACAC
ATAGGTTGGT ACAGTAGCGG GCTTCAAGGC TCATCTGAAT TTCGTGTGAG AGTAAATAAC
ATGACAGATA GCACAGAAGT GAAAGAAAAT ATTATTGGCT TTTTTGGTCA AGAGACACAC
TAG
 
Protein sequence
MPLQIGNLTI DSPVILAPMS GVTDYPFRSI VKKLGASLLV SEMIASRAMI MQTRQSLQKA 
KVDALTAVQL AGCEPDVMAE AAKLNEDMGA KIIDINFGCP VKKVVNGYAG SALMRDEKKA
AEIIEAVVKA VNMPVTVKMR TGWNDENRNA PRLAKIAEDL GAKMITVHGR TRAQLYNGQA
DWKFVRNVKE QVKIPVIVNG DIKNLNDIQN ALKESGADGV MIGRGAYGKP WLINQAMNFL
SGSETSEPTA SERLSIILEH YDNILEYYGN DTGIKMARKH IGWYSSGLQG SSEFRVRVNN
MTDSTEVKEN IIGFFGQETH