| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | MCA3081 |
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| Symbol | |
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| ID | 3103699 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Methylococcus capsulatus str. Bath |
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| Kingdom | Bacteria |
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| Replicon accession | NC_002977 |
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| Strand | - |
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| Start bp | 3265423 |
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| End bp | 3267555 |
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| Gene Length | 2133 bp |
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| Protein Length | 710 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 637172207 |
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| Product | sensory box protein/response regulator |
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| Protein accession | YP_115468 |
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| Protein GI | 53802775 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG3437] Response regulator containing a CheY-like receiver domain and an HD-GYP domain
[COG5001] Predicted signal transduction protein containing a membrane domain, an EAL and a GGDEF domain |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box
[TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.789878 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAACGAAA CGGATGACCG GCAAGCCCGT ATCTTGATCG TCGATGACGC CTTGGCGAAC
GTCGGCCTGT TGCTGGACGC CCTGGAACCC GAGTTCGACG TCCAGTTCGC GACGTCCGGG
ACCGAGGCGT TATTTCTGTT GGAAGCGGGG GCGCAGCCCG ACCTCATCCT CCTCGACGTG
GCGATGCCGG ACATGGACGG CTTCGAGGTT TGCCGGCGGC TCAAGGCGGA CGGGAGGACC
CGCGACATCC CGGTCATCTT CCTGACCGCC GAGGATGGGG AACACGACGA AACCTTCGGC
TTGGCTCTCG GGGCGGTGGA CTACATCGCC AAGTCGTCTC CCATGGCCAT CGTGAAGGCG
CGGTTGCGCA ACCATGCCAG ACTGGTCATG CAGGAACGGC GCCTGCAGCG GGAGATCGCC
GAGCACAAGG CAGCCCGGGA GCAGCTGCAA GTGGCCGGAA TGGTGTTCAG CGCCTCCAGC
GAAGGCATGC TGCTGGTGAA TGCCGACAAC CGGATCGTGG CGGTCAACCC CGCTTTCGTC
GCCCTCACCG GATACGGGCC GGAAGACGTG GTCGGCAAGG ACCCGAAGCT GCTGCAATCG
GGGCGGCACG GTCCCGCCTT TTACCAGGCC ATGTGGGCGG CCCTCGAGGC TACCGGAACC
TGGCGCGGCG AGATCTGGAA CAGGCGCAGG AACGGCGAGG AATACGCCGA GCATCTCACC
ATCAACACGA TTTACGACGA AGCCGGCAAA GTCCACCTAC GCGTCGCCCT GTTCTCCGAC
ATCACCGAGA AAAAGGCGTC GGAAGCCCTG ATCGAGTTCC AGTCCTGCTA CGACGCCCTG
ACCCGGTTGC CCAACCGACG GTTGCTCGCC GAGCGCCTGG CACTGGCCAG TGAACGGGCG
CACCGCGACC GCGGCCGCGT GGCGCTGTTA TACATCGATC TGGATCATTT CAAGGAGGTC
AACGACACAC TGGGGCACCA CCAGGGTGAT GCCCTGCTGG TCCAGGTGGC CCACCGCGTC
CGGCGCTGTG TCCGCGAGTC GGAGACCGTA ACCGTCGCCA GGCTCGGGGG CGACGAGTTT
ACCGTGATCG TACCGGACTT CGAAGGCATG GATGAGGTCG AGCGGCTGGC ACGCGCCATC
ATCGACAGCC TGAGCGAGCC TTTCCGCCTC GGGGATCAAC TCGCCCATGT TTCCGCGAGC
ATAGGTATCA CCGTCTTTCC GGACGACGCC GCCGACACCG ACGGTCTTTT GCGGAATGCC
GATCAAGCGA TGTATGCGGC CAAGCGGGCG GGGCGCAACG GTTACCAGGC GTTCAATCCG
GAGATGCAGC GCGCCATGTC GATGCGGGTA CGCCTGAGCC AGGCGCTGCG GGACGCGGTG
CAGGCGGGTC AGTTGCGTTT GCATTACCAA CCCATCGTCG AACTGGCGTC CGGACGGGTA
CGCAAGGCCG AGGCCCTGTT GCGGTGGGAG CATCCCGAGT TCGGCGAGGT GAGTCCCGCC
GCCTTCATAC CGATCGCCGA AGACTGTGGC AGCATACATT GCATCGGCGA TTGGGTGTTC
GAGCGGGCGG CTTGCCAGGC GGCCCGCTGG CGGAGCCGGT TCGGGACCGA TTTCCAGGTC
AGCATCAATG TCTCGCCCCG GCAGTTTCAA GCCGGCGGCA GGGATTTCGG TCGCTGGCTG
GAACGGCTGG GGGAACTCGG GCTGGATGGA AGTATGCTGG CGCTCGAAAT CACCGAGACG
CTGCTGATGG ATACGGACCA GGCGATCGCC GACAAGCTCG CCCAGTTTCG GGCCGCGGGT
GTGCAGATTG CGCTCGACGA TTTCGGGACG GGGTATTCTT CGCTTGCGTA TCTCAAGGAA
TTCAGAATCG ATTACCTCAA AATCGACCGG ACGTTCGTTC GGGACATGAC GCCGGATTCC
AAGAGCTTCT TGTTGTCGGA AGCCATCGTA ACGATGGCGC ACCGGCTGGG CTTGAAGGTC
ATCGCGGAAG GGGTGGAAAC TCCGCAGCAG TACGCGCTGC TCGAGCGCAT CGGCTGCGAT
TACTTCCAAG GATACCTGTT TTCCAGGCCG CTGCCGGAGG ATGCGTTCGA GGGCTTGCTG
CGATCGGCCT CCTGCGAGGC TGTATGTCCA TGA
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| Protein sequence | MNETDDRQAR ILIVDDALAN VGLLLDALEP EFDVQFATSG TEALFLLEAG AQPDLILLDV
AMPDMDGFEV CRRLKADGRT RDIPVIFLTA EDGEHDETFG LALGAVDYIA KSSPMAIVKA
RLRNHARLVM QERRLQREIA EHKAAREQLQ VAGMVFSASS EGMLLVNADN RIVAVNPAFV
ALTGYGPEDV VGKDPKLLQS GRHGPAFYQA MWAALEATGT WRGEIWNRRR NGEEYAEHLT
INTIYDEAGK VHLRVALFSD ITEKKASEAL IEFQSCYDAL TRLPNRRLLA ERLALASERA
HRDRGRVALL YIDLDHFKEV NDTLGHHQGD ALLVQVAHRV RRCVRESETV TVARLGGDEF
TVIVPDFEGM DEVERLARAI IDSLSEPFRL GDQLAHVSAS IGITVFPDDA ADTDGLLRNA
DQAMYAAKRA GRNGYQAFNP EMQRAMSMRV RLSQALRDAV QAGQLRLHYQ PIVELASGRV
RKAEALLRWE HPEFGEVSPA AFIPIAEDCG SIHCIGDWVF ERAACQAARW RSRFGTDFQV
SINVSPRQFQ AGGRDFGRWL ERLGELGLDG SMLALEITET LLMDTDQAIA DKLAQFRAAG
VQIALDDFGT GYSSLAYLKE FRIDYLKIDR TFVRDMTPDS KSFLLSEAIV TMAHRLGLKV
IAEGVETPQQ YALLERIGCD YFQGYLFSRP LPEDAFEGLL RSASCEAVCP
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