Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | MCA3061 |
Symbol | hemDX |
ID | 3103622 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Methylococcus capsulatus str. Bath |
Kingdom | Bacteria |
Replicon accession | NC_002977 |
Strand | + |
Start bp | 3245998 |
End bp | 3248016 |
Gene Length | 2019 bp |
Protein Length | 672 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 637172187 |
Product | bifunctional uroporphyrinogen-III synthetase/uroporphyrin-III C-methyltransferase |
Protein accession | YP_115448 |
Protein GI | 53802805 |
COG category | [H] Coenzyme transport and metabolism |
COG ID | [COG1587] Uroporphyrinogen-III synthase [COG2959] Uncharacterized enzyme of heme biosynthesis |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCGCGTCC TCGTCACGCG ACCGAAGGAA CAGGCCGAAC CCCTGTGCAG GCTGATCGAA ACGGCAGGCG GCAAGGCGGT CCGTTTCCCC CTGCTCGACA TCGAGCCGAG CGCGCAGGCG GAAGAGGGAG CGGCTCTCCT CCGGCAGGCA TCGGATTGGG ACTGGTGGAT CTTCGTCAGC GTCAACGCGG TGAACCGGGC CCGGGCTCTG GATGTGCTTC GGCCGGACGG TGCCGGGCCG CGCATCGCCG CCATCGGCAA AGCCACGGCC GATGCCCTGG TCGACGGCGG GATTGCCGTG GACCTCGTTC CGGAATCGCA GGCCAATTCG GAAGGACTGC TGGAGACGCC CCCGATGCGG GACGTCGCAG GCCGGCGGAT CCTCATCGTG CGCGGCGAGG GCGGGCGGGA AACGCTCAAG GAACGGCTTG TCGAACGTGG GGCACTGGTC CAGTATGCCG AGCTGTACCG GCGGGTGCCG GTGCACACGG GTGCCGAAGC ACTGATCGAA GGCCTGCGGA CCGCCGGGCT CGACATGCTG ACCGCCACCA GCGGCGAAGC CATCGAGCAT CTGTACCGCC TGGTTCCACC CGAGGACCGG CCGCGGCTGG TCGAGACGCC GCTGGTCGTC ATCAGCGAAC GATTGAAAAA TCAAGCCGGA TCGCTGGGTT TCCGGCACGT GAAGGTGGCC GACGCCGCAT CGGATGCCGC CGTGCTGCAA GCCCTGGAGG ATGTCGCAGC CCGTTTGGCA TCCTTGCGAG CCGCGCCCAA CGACGGGGAT AAGCCATTGG CCGAGGAAGA AAAACAAATG ACCGAAGCGC CGCAATCACC GGCAGCCGGG GAAGTCTCCC GACACCCGCA CGGCAACGCT GCCGCGCCTC CGGTGCATCC GCCGCGCAGA TCGCGGGTAG TCGCCTGGCT GGGCTACTCG ATGCTGGCCG CCATTCTGCT GCTGGCCACC GCCGGCTATT TCCTGATCCA GGAACTGCGC TCCAAGCAGG AGGGTCTGGG CGGCGAGCTC AACAAGGGCG ATCTGCACTT GCTGGAACTC AGCCGCCAGG TCAGCAGCCT GCAGACTCAA CTCGCCACCC TCCATTCCCA GTTCGCCACC CTCCAGTCCC AGCTCGGGAC GGAGGACAGC AAGCTGGAGC GTCTGCTCGG CGAGCAATCC GCCAGTTTCG GCCAGAGGCT CGAGGACAGC CGCAAAGAAC TGACGCGGTC CATCGAGACC CTCCAGCGTC AACTAAGCCG GACCCACAGC GATGTCCTGA TCGCGGATGC CGAATATCTT TTGGGCATTG CCAATCAGAA GCTGCACCTC ACCGGTGACG TGAAATCCGT CCTCGAAGCC ATGAAGGCCG CGGACCAAAG ACTCCGTGAC AGCGACGACC CCGGCGTGTT CAAGGTGCGG GAGGTCTTGG CGGAGGAAAT CAACCGACTC GAGGCCTTCC AGCCGCCCGA CGTGGTCGGA CTGTCGGCCA GGCTGCTGGC GATTGAAGCC AAGACGCGGG AGCTGCCGCT GTTCCTGCCA CATCCCGACA TGTCGAAGGA ACCGCGCGAG ACGTCCAAGC CCAAATCACC GGAACCCGAA ACCGGCGATG CCGTCGAGTC CACCCTCGAG CAGCTCAAGG GACTGGTCAC CGTGCGCCGC AGCGACCGCC CCGTGCATGC CGTCCTGACT CCCCAGGAGG CCGCCGGCCT CCGGGAAATC CTGCTGCTCA AACTGGAGAT GACCCGCACC TCCCTGTTGC GCGGCGACGA TGCACTGTTC CACAGCAATC TGGAATCCGC AAACGCCTGG CTGAACGAAA ATTTCGACCG CGAGTCCCCC GCCTTCAAGG ACATCTCGGA CGATCTCCGG GCCCTGGCCG GCGTCCAGCT CAAGGCCGCC TTCCCCGACA TCAGCGGATC ACTCGCCTTG CTCCGCAACA TCGAAAAACT GCGGCTCGAA ACCGACCCCG TCGCACCGGC AAGCACGGCC GCCCCCGCCG GGAATGAAGC GCCGGGAGAC AGACCGTGA
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Protein sequence | MRVLVTRPKE QAEPLCRLIE TAGGKAVRFP LLDIEPSAQA EEGAALLRQA SDWDWWIFVS VNAVNRARAL DVLRPDGAGP RIAAIGKATA DALVDGGIAV DLVPESQANS EGLLETPPMR DVAGRRILIV RGEGGRETLK ERLVERGALV QYAELYRRVP VHTGAEALIE GLRTAGLDML TATSGEAIEH LYRLVPPEDR PRLVETPLVV ISERLKNQAG SLGFRHVKVA DAASDAAVLQ ALEDVAARLA SLRAAPNDGD KPLAEEEKQM TEAPQSPAAG EVSRHPHGNA AAPPVHPPRR SRVVAWLGYS MLAAILLLAT AGYFLIQELR SKQEGLGGEL NKGDLHLLEL SRQVSSLQTQ LATLHSQFAT LQSQLGTEDS KLERLLGEQS ASFGQRLEDS RKELTRSIET LQRQLSRTHS DVLIADAEYL LGIANQKLHL TGDVKSVLEA MKAADQRLRD SDDPGVFKVR EVLAEEINRL EAFQPPDVVG LSARLLAIEA KTRELPLFLP HPDMSKEPRE TSKPKSPEPE TGDAVESTLE QLKGLVTVRR SDRPVHAVLT PQEAAGLREI LLLKLEMTRT SLLRGDDALF HSNLESANAW LNENFDRESP AFKDISDDLR ALAGVQLKAA FPDISGSLAL LRNIEKLRLE TDPVAPASTA APAGNEAPGD RP
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