| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | MCA3038 |
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| Symbol | trmE |
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| ID | 3103934 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Methylococcus capsulatus str. Bath |
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| Kingdom | Bacteria |
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| Replicon accession | NC_002977 |
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| Strand | + |
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| Start bp | 3223645 |
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| End bp | 3224991 |
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| Gene Length | 1347 bp |
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| Protein Length | 448 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 637172164 |
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| Product | tRNA modification GTPase TrmE |
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| Protein accession | YP_115425 |
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| Protein GI | 53802851 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0486] Predicted GTPase |
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| TIGRFAM ID | [TIGR00231] small GTP-binding protein domain
[TIGR00450] tRNA modification GTPase TrmE |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.38062 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCAGCCC CCGATCGAGA CACCATAACC GCGATCGCCA CGCCGCCCGG CAAGGGCGGC
GTCGGCATCG TCCGCATTTC CGGCAGCAAT CTCGGACCGG TTCTCGACGC CCTGCTCGGC
CGCCCGCCGC GTCCCCGCTA CGCCGAGTTC CGCCATTTCC TGGACGCCGA CGGCCGCGCC
ATCGACAGCG GTATCGCACT GTATTTTCCC GCACCCCGCT CGTTCACGGG CGAAAACGTC
CTCGAACTGC ACGGCCATGG CGGCCCAGTG GTCCTGGACC TCCTGCTGCG ACGTACGCTG
CAGTTGGGAT GCCGGCTCGC CCGACCGGGG GAGTTTTCCG AACGCGCCTA TCTGAACGGA
AAGCTGGACC TCGCCCAGGC CGAAGCCATC GCCGACCTCA TCGACAGCAG CACTGAAGAA
AGCGCCCGCT CTGCACAGCG CTCGCTCCAG GGCGAGTTTT CCGCTCACAT CCATCACCTG
CAGGAATGCC TCGTCCGGCT CCGGACCTAC GTCGAAGCCG CCATCGACTT CAGCGACGAG
GACATCGACC TGCTGGATGA CGCCACTCTC GGCCATGAGA TCACCGGACT ACTGGACGAG
CTCGACACCA TCGACACCAA GGCGCACCAA GGGGCATTGC TGCGCGAAGG TCTCACGACG
GTGATCGCAG GACGTCCCAA TGTCGGCAAA TCCAGCCTGC TCAACGCCCT GGCCGGCCGC
GACTTGGCGA TCGTGACCGA GATTCCCGGC ACCACCCGCG ACCTCCTCCG CGAATCGCTG
CAGGTTGGCG GCCTCCCCCT GCATATCGTC GACACCGCGG GACTGCGCGA CAGCGAAGAC
CCGATCGAAC GCGAAGGCAT CCGGCGCGCC CGGGATGCAC TCGCCAACGC CGACTGCATC
CTGCTGGTCT GCGACGCCCG CCACACCGAA GCCGGCGACG CCCTGCCCGC GGACCTGCCG
GAAACCATCC CGCTCATCCG GATCTTCAAC AAGATCGACC TGACGGGGGC GCCGGCATCC
CTGACGGTCG AACGAGAAAC CACCGTGATC CATCTTTCCG CTCGCACCGG CGAAGGTGTC
GATCTGCTGA GGCAGGAAAT CATCCGTCGC GCGGGTTACA AGAAAGGCAC CGAAGGGGTG
TTCAGTGCCC GCCGACGGCA TCTGGACGCC ATCCGAAGAG CCCGCGCCGC CGTGGCCAAC
GCCCGCCTCT ACCTGCACAC CAAGACTGCC GAACTCCTGG CCGAGGAACT CCGCGCCGCC
CAGAAAGCGC TGGGCGAGAT CACTGGCGAA TTCACCAATG AGGACTTGCT GAACCGGATA
TTTTCGAGTT TCTGTCTCGG CAAATAG
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| Protein sequence | MAAPDRDTIT AIATPPGKGG VGIVRISGSN LGPVLDALLG RPPRPRYAEF RHFLDADGRA
IDSGIALYFP APRSFTGENV LELHGHGGPV VLDLLLRRTL QLGCRLARPG EFSERAYLNG
KLDLAQAEAI ADLIDSSTEE SARSAQRSLQ GEFSAHIHHL QECLVRLRTY VEAAIDFSDE
DIDLLDDATL GHEITGLLDE LDTIDTKAHQ GALLREGLTT VIAGRPNVGK SSLLNALAGR
DLAIVTEIPG TTRDLLRESL QVGGLPLHIV DTAGLRDSED PIEREGIRRA RDALANADCI
LLVCDARHTE AGDALPADLP ETIPLIRIFN KIDLTGAPAS LTVERETTVI HLSARTGEGV
DLLRQEIIRR AGYKKGTEGV FSARRRHLDA IRRARAAVAN ARLYLHTKTA ELLAEELRAA
QKALGEITGE FTNEDLLNRI FSSFCLGK
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