Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | MCA3024 |
Symbol | rph |
ID | 3103933 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Methylococcus capsulatus str. Bath |
Kingdom | Bacteria |
Replicon accession | NC_002977 |
Strand | - |
Start bp | 3208367 |
End bp | 3209098 |
Gene Length | 732 bp |
Protein Length | 243 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 637172150 |
Product | ribonuclease PH |
Protein accession | YP_115411 |
Protein GI | 53802880 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0689] RNase PH |
TIGRFAM ID | [TIGR01966] ribonuclease PH |
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Plasmid Coverage information |
Num covering plasmid clones | 24 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAGACCCA GCGGACGCCG TCCCGATCAA CTCCGTCGCA TCGCCTTCAC CTGCAACTAC ACCAAGCACG CCGAAGGCTC GGTGCTCGTC GAATTCGGCG ATACCCGCGT CATCTGCACC GCGAGCGTGG AGGAGCGGGT TCCGCCTTTC CTCAAAGGCA AAGGCAGCGG CTGGATCACC GCCGAATACG GCATGCTGCC GCGTGCCACC CACGAGCGTA CCGGCCGTGA GGCCGCCCGC GGCAAGCAAG GGGGGCGGAC CATGGAGATC CAGCGCCTGA TCGGCCGCTC CCTGCGCGCC GCGTTGAACC TGGAAGCCCT GGGCGAGCGC ACCGTCACCC TCGACTGCGA CGTCATCCAG GCCGACGGTG GCACCCGCAC CGCATCGATC ACCGGCGGCT ACGTGGCTCT GGTGCTGGCC GTGCAGCGGT TGCTGAAAAG CCGCAAGATC AAGACCAATC CGGTGCACGG TCAGATCGCT TCGGTCTCCG TCGGCATCTG CCAGGGGGTT CCCGTCCTCG ACCTGGACTA CGCCGAGGAC TGCGACGCCG AAACAGACAT GAACGTGGTC ATGAACGACG CCGGCGCCTT CATCGAAATC CAGGGCACGG CCGAAGGCCA TGCGTTCCGC CGCGACGAGC TGGATGCCAT GCTGCGGCTC GCCGAGGCCG GCATCGCCGA TCTCCTGCTG CACCAGCAGG AGGCGTTGGA TGGCTGTGGC ATCAAAAGCT AG
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Protein sequence | MRPSGRRPDQ LRRIAFTCNY TKHAEGSVLV EFGDTRVICT ASVEERVPPF LKGKGSGWIT AEYGMLPRAT HERTGREAAR GKQGGRTMEI QRLIGRSLRA ALNLEALGER TVTLDCDVIQ ADGGTRTASI TGGYVALVLA VQRLLKSRKI KTNPVHGQIA SVSVGICQGV PVLDLDYAED CDAETDMNVV MNDAGAFIEI QGTAEGHAFR RDELDAMLRL AEAGIADLLL HQQEALDGCG IKS
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