| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | MCA2996 |
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| Symbol | ispB |
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| ID | 3103140 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Methylococcus capsulatus str. Bath |
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| Kingdom | Bacteria |
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| Replicon accession | NC_002977 |
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| Strand | - |
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| Start bp | 3169214 |
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| End bp | 3170236 |
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| Gene Length | 1023 bp |
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| Protein Length | 340 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 637172122 |
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| Product | octaprenyl-diphosphate synthase |
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| Protein accession | YP_115384 |
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| Protein GI | 53802938 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG0142] Geranylgeranyl pyrophosphate synthase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAATAATC ACGCTATCTC CGATCCAGGG GCCGCCGATC TTCGCGATTC CCGCGAGGTT
TTTGCCGGTA TCCGCCGTCT CGTCGACGGC GAGGCGGCTG CGGTCGATAG CCTGATCTTG
CGCGAGCTGC ATTCCGATGT GGTACTCATC AATCAGATCG GGCAATACAT CGTCGGCAGC
GGCGGCAAAC GCCTGCGCCC CATGCTCCAT CTGCTTTCGG CCAAGGCGTT GGGTTATCCG
GGCGACCACC ATATCACCCT GGCAGCGGTC ATCGAGTTCA TCCACACCGC GACGCTGCTG
CACGATGACG TCGTCGATGA ATCCGCGCTG CGCCGGGGGC AGGACTCTGC CAATGCGCTC
TGGGGTAATT CCGCGAGCGT GTTGGTAGGG GATTATCTGT ACTCGCGTTC ATTCGAGCTG
ATGGTGCGGG TCCAGGATAT GCGAGTGATG GACATCCTGT CCCGCACCAC CACGGCCATC
GCCGAGGGCG AGGTGCTGCA GCTGCTCAAT TGCAACAATC CGGCGACCGA CGAGGGGCGC
TACCTGGACG TCATCTCTCG CAAGACGGCG ATATTGTTCA GCGCTGCCGC CCAGCTTGCC
GCGGTGCTCG CCGGCTCGTC GCACGCAGTC GAAGAATCCC TGAAAAATTA CGGGACATAT
CTCGGAATCG CCTTCCAGCT CAAGGACGAC GTGTTGGACT ACAAGGCCGA TCCCGAAGAG
TGGGGCAAGA ACCTCGGTGA CGACCTCGCC GAAGGCAAGC CGACACTGCC ATTGATCTAT
GCGCTGTCCC AGTCCTCCGG CGCGGAGGCC GAGCTCTTGC GGCAAGCGAT AGAGCACGGC
GAGCGGGAAC ACTTCAAAAA AGTGTACGCA GTGATTGAGT CGACCGACGC AATCTCGTAT
ACTGAGCGGC GTGCCAGGGA TGCTGCGAAC AAAGCCATTG AGCAGGTTAC CCATCTTCCC
GAGAGTGGTT ACAAGGATGC CTTGATCGCT CTTGCACGGT TCGCGGTCGA TCGCGGCTAT
TGA
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| Protein sequence | MNNHAISDPG AADLRDSREV FAGIRRLVDG EAAAVDSLIL RELHSDVVLI NQIGQYIVGS
GGKRLRPMLH LLSAKALGYP GDHHITLAAV IEFIHTATLL HDDVVDESAL RRGQDSANAL
WGNSASVLVG DYLYSRSFEL MVRVQDMRVM DILSRTTTAI AEGEVLQLLN CNNPATDEGR
YLDVISRKTA ILFSAAAQLA AVLAGSSHAV EESLKNYGTY LGIAFQLKDD VLDYKADPEE
WGKNLGDDLA EGKPTLPLIY ALSQSSGAEA ELLRQAIEHG EREHFKKVYA VIESTDAISY
TERRARDAAN KAIEQVTHLP ESGYKDALIA LARFAVDRGY
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