Gene MCA2980 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMCA2980 
SymbolhslO 
ID3104392 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethylococcus capsulatus str. Bath 
KingdomBacteria 
Replicon accessionNC_002977 
Strand
Start bp3155284 
End bp3156153 
Gene Length870 bp 
Protein Length289 aa 
Translation table11 
GC content60% 
IMG OID637172105 
Productchaperonin HSP33 
Protein accessionYP_115369 
Protein GI53802839 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG1281] Disulfide bond chaperones of the HSP33 family 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAAAATT CCGACACCTT TCAGCGCTTC CTGTTCGAAG ACATGGGCAT CCGCGGCGAA 
CTGGTCCGCC TCGATGCCAG CTGGCAAGCC GTGCTTCAGC GGCATACCTA TCCCCTCAAC
GTGAGCCGTC AGCTGGGCCA GGCCCTCGCC GCCGTGACGC TGCTGTCCGG AACGATCAAG
TTCAAAGGGG CCTTGATCAT CCAGACCCAG AGCCGGGGAC CATTGCACAC GCTGGTGGTC
CAGGCCACCC ATCGCCAGAC GATACGAGGC CTTGCCCACT GGCGCGATCC GGTGCCGGAA
GGGAACTTGA GCGAAGTTTT CGGGGAGGGC AGGCTGGTCC TCACGATCCA GAAAGAGGGG
GAGGAATCCT ACCAGGGTGT GGTCTCGCTG GAGGGACAGT GCCTCGCAGC GGCTCTGGAA
GGTTATTTCG CCCATTCCGA ACAACTGGCG ACCCGGCTCT GGCTATTCGC GGACGGCCAG
CGTGCCGCCG GGCTGTTCCT GCAGGCCCTT CCAACCCAGA CGCCTACCGA GGAAGACTGG
ATGCGGCTGG TCACCCTGGC TGACACGGTC ACGGAACACG AAATGCTTCA TCTGCCGTTC
GAAGACCTGC TCTACCGGCT CTATCACGAG GAAAAAGTAC GCCTATTCGA AGCCGAACCC
GTGGTATTCC GTTGCTCCTG TTCGCGGCAG CGCATCGAAG ACATGCTGCT GGCCCTGGGC
AAAGCGGATG TGGAGGACAT ACTGGCGGAA AAAGGCTGCG TGGAAGTGGA TTGCGACTTC
TGCAACAAGC GCTACCAGTT CGACCTCGTC GACATTGGCG TCCTGTTCTC CGAAGAAATC
AAGAGCCCGC CTTCATCTAC CAAGCATTGA
 
Protein sequence
MKNSDTFQRF LFEDMGIRGE LVRLDASWQA VLQRHTYPLN VSRQLGQALA AVTLLSGTIK 
FKGALIIQTQ SRGPLHTLVV QATHRQTIRG LAHWRDPVPE GNLSEVFGEG RLVLTIQKEG
EESYQGVVSL EGQCLAAALE GYFAHSEQLA TRLWLFADGQ RAAGLFLQAL PTQTPTEEDW
MRLVTLADTV TEHEMLHLPF EDLLYRLYHE EKVRLFEAEP VVFRCSCSRQ RIEDMLLALG
KADVEDILAE KGCVEVDCDF CNKRYQFDLV DIGVLFSEEI KSPPSSTKH