Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | MCA2821 |
Symbol | |
ID | 3104106 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Methylococcus capsulatus str. Bath |
Kingdom | Bacteria |
Replicon accession | NC_002977 |
Strand | - |
Start bp | 3011626 |
End bp | 3012705 |
Gene Length | 1080 bp |
Protein Length | 359 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 637171950 |
Product | electron transport complex, D subunit |
Protein accession | YP_115215 |
Protein GI | 53802985 |
COG category | [C] Energy production and conversion |
COG ID | [COG4658] Predicted NADH:ubiquinone oxidoreductase, subunit RnfD |
TIGRFAM ID | [TIGR01946] electron transport complex, RnfABCDGE type, D subunit |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAGTCTGT CGCTGTCGAG CGCGCCCTTC ACCCGTTCGG ACAGCCAGGT CCAGGGGATA ATGGCGGCGG TGGTTCTGGC GCTGGTGCCG GCCACCGTGT TCGGTGTGGT GATCTTCGGC TGGCCCGCGT TTTTCCTGTG GACGGTGACC GTCCTCTCGG CTCTGGTGTT CGAGGCGGCT TGTCTCACCC TGGCGGGCAA ACCGGTCAAG GCGGTTCTAC TGGATGGCTC CGCCCTGCTG AGCGGTTGGC TGGTGGCCAT GACGCTGCCG CCCTGGGCGC CGTGGTGGAT CGGCGTGGTG GGTGCCGGGA TCGCCATCGT GGTCGGCAAA CAGGTGTTCG GCGGTCTCGG CCAGAACCCG TTCAATCCGG CGATGCTGGC GCGTGTGGCC CTTCTGGTGG CGTTCCCCCT GGAAATGACC ACCTGGGCGC TGCCTTCGCT GCCGTTTTCC TCATCCGCGC CGGGACTGTC CGACGGCCTG GCCATCACCT TCGCCGGCGC GTCTGCGGTG GACGGCATGA CCGGACCGAC GCTGATCGGC AACTGGAAGA CCGAACTTTC CCAGGGGCGG GGATTGAGCG AATCGCTGGT TTCCGGCCAT TACAACGTAG TGGCTTCGCT GCTCGGCTGG AAGGCGGGCA GCCTGGGCGA GACCTCCTCC CTGCTGGTGG CCCTGGGCGG ACTCTGGCTG CTGAAGAAAA AGATCATCGG CTGGCACATC CCCGTGTCGC TGTTGGCGAC GGTGGCGGTC TTGGCCTCGG TCTTCGCCCT GATCGATGGT GAGCGCTACG CCGGCCCCGT CTTCCATCTG ACTTCCGGCG CCGTGATGCT GGCGGCGTTC TTCATCGCCA CCGATTACGT CACTTCCCCC AGCAGTCCGG CCGGCCAGTT GATTTTCGGC GCGGGTTGCG GCCTGTTCAT CTTCGTCATC CGCACCTGGG GAGCTTACCC GGAAGGCGCC GGGTTCTCGG TGTTGCTGAT GAACGCGCTG ACGCCGGTCA TCGACCATTA CGTGCGGCCG CGCGTCTACG GACGCGATCT CAAAGGCCGG CCGCTGGACC TGCCGGGAGG GCGGCGGTGA
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Protein sequence | MSLSLSSAPF TRSDSQVQGI MAAVVLALVP ATVFGVVIFG WPAFFLWTVT VLSALVFEAA CLTLAGKPVK AVLLDGSALL SGWLVAMTLP PWAPWWIGVV GAGIAIVVGK QVFGGLGQNP FNPAMLARVA LLVAFPLEMT TWALPSLPFS SSAPGLSDGL AITFAGASAV DGMTGPTLIG NWKTELSQGR GLSESLVSGH YNVVASLLGW KAGSLGETSS LLVALGGLWL LKKKIIGWHI PVSLLATVAV LASVFALIDG ERYAGPVFHL TSGAVMLAAF FIATDYVTSP SSPAGQLIFG AGCGLFIFVI RTWGAYPEGA GFSVLLMNAL TPVIDHYVRP RVYGRDLKGR PLDLPGGRR
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