Gene MCA2620 details

Gene Information

• Locus tag: MCA2620
• Symbol: smpB
• ID: 3103118
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Methylococcus capsulatus str. Bath
• Kingdom: Bacteria
• Replicon accession: NC_002977
• Strand: -
• Start bp: 2806860
• End bp: 2807333
• Gene Length: 474 bp
• Protein Length: 157 aa
• Translation table: 11
• GC content: 60%
• IMG OID: 637171754
• Product: SsrA-binding protein
• Protein accession: YP_115024
• Protein GI: 53803227
• COG category: [O] Posttranslational modification, protein turnover, chaperones
• COG ID: [COG0691] tmRNA-binding protein
• TIGRFAM ID: [TIGR00086] SsrA-binding protein

Plasmid Coverage information

• Num covering plasmid clones: 25
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAGCAGCA AGAAAAGCGC CCCAGGAAGC GCCAACATCG CCCAGAACCG TCAGGCCACC 
CATGAATATT TCATCGAGGA GCGCCTTGAA GCGGGTTTGG TGCTGGAGGG CTGGGAAGTC 
AAGAGTCTGC GGGCGGGCAA GGCGCAACTC AAGGAAAGCT TTGTAATGCT GAAGAACGGC 
GAAGCATGGC TGTTCGGCGC GCATTTCTCT CCCTTGCCAT CGGCTTCCAC CCACGTCCAG 
CCCGATCCCA CCCGCAGCCG TAAGCTGCTC TTGCATGCAG AGGAACTCAG CCGTCTGATC 
GGACAGGTGG AGCGCAAGGG TTATACCCTC GTGCCGTTGT CGCTGTACTG GAAACAGGGC 
CGCGCGAAGC TGGAAATCGG CCTGGCGCGC GGAAAGAAAC AACATGACAA GCGTGCTGCC 
GAGAAGGAGC GCGACTGGGA GCGGGAGAAA CAGAGGGTCA TGCGGCGGGG TTGA 

 

Protein sequence

MSSKKSAPGS ANIAQNRQAT HEYFIEERLE AGLVLEGWEV KSLRAGKAQL KESFVMLKNG 
EAWLFGAHFS PLPSASTHVQ PDPTRSRKLL LHAEELSRLI GQVERKGYTL VPLSLYWKQG 
RAKLEIGLAR GKKQHDKRAA EKERDWEREK QRVMRRG