Gene MCA2542 details

Gene Information

• Locus tag: MCA2542
• Symbol: ntrB
• ID: 3102529
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Methylococcus capsulatus str. Bath
• Kingdom: Bacteria
• Replicon accession: NC_002977
• Strand: -
• Start bp: 2718424
• End bp: 2719518
• Gene Length: 1095 bp
• Protein Length: 364 aa
• Translation table: 11
• GC content: 63%
• IMG OID: 637171683
• Product: nitrogen regulation protein NR(II)
• Protein accession: YP_114953
• Protein GI: 53803352
• COG category: [T] Signal transduction mechanisms
• COG ID: [COG3852] Signal transduction histidine kinase, nitrogen specific
• TIGRFAM ID: [TIGR00229] PAS domain S-box

Plasmid Coverage information

• Num covering plasmid clones: 22
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGACGGCAT CGGACACACC TTCCTTCTAC CGGCGCATCC TCGACAACCT GGGGGACGGT 
GTGCTGCTGT TCGATAAAAC GCTGACCCTG ACCTACATCA ACATGCCCGG CGAAATGTTG 
CTCGCCGTCA GCGCCCGTCA GGTGCTGGGC GCCCGCGCAC GTCTGGTATT GCCGTGCGGC 
GAACAGCCGG TCGAGCCGGA TTTGCGGCAC GCCATGGAGA CCGGCATTTC CCTGACCAAG 
CGCAATGTCA CGCTGGTTCA TCCGCTCCAT GTGATCACGG TGAATCTGCA CATCTCGCCG 
ATCACCGAGG ACGAGGCCAC CGGGGTACTG GTCCAGGTGC AGCAGGTGGA TCGCCATTTG 
CGGATTTCCA TGGAGGAGCA GTTGCTGGCG CAGCAAAACG CGGCCAGGTC ACTGCTCAGG 
GGATTGGCGC ACGAGATCAA GAATCCGCTC GGGGGGCTGC GCGGCGCGGC GCAGCTCCTG 
GAGCGGGAGC TGCAGGACGA GCTGCGTGAG TATACCCAGA TCATCATCGA GGAGTCCGAC 
CGTCTCCAGT CCCTGCTGGA CCGGATGCTC GGGCCGAACA AGCTGCCACA GAAGGCCTGG 
CTGAACATCC ACCGGGTGCT GGACCGGGTG ACCCAGCTGG TGCAGGCGGA AGTGCCCGCC 
GGTGTCCGGA TCGTCCGTGA CTACGATCCG AGCATCCCGG AAATCTTCGG CGACGCCGAT 
CAGTTGATCC AGGCCATCCT CAACATCGTG CGCAATGCCG CCCAGGCCCT CGGTATGCAC 
GGCCGGATCG TCATCCGCAG CCGCATCGAC CGGCAGGTGA CGATCGGTGA GCGGCGCCAT 
CGCATGGCGG TGAAAATCGA CATCATCGAT GACGGCCCCG GTATCAAGCC GGAACTCCTG 
AACCATATTT TCTATCCGAT GGTCACCGGG CGGGCCGAGG GCACGGGCCT GGGATTGTCG 
ATCGCACAGG GGCTGATCAG CCAGCACGGC GGCTTGATCG AGTGCAGCAG CGTGCCCGGA 
AACACCGTTT TTTCCCTGTT TTTGCCTTTG GAGGAGGATC ATGAAGCGAG CGTTCCAGGT 
TTGGGTGGTC GATGA 

 

Protein sequence

MTASDTPSFY RRILDNLGDG VLLFDKTLTL TYINMPGEML LAVSARQVLG ARARLVLPCG 
EQPVEPDLRH AMETGISLTK RNVTLVHPLH VITVNLHISP ITEDEATGVL VQVQQVDRHL 
RISMEEQLLA QQNAARSLLR GLAHEIKNPL GGLRGAAQLL ERELQDELRE YTQIIIEESD 
RLQSLLDRML GPNKLPQKAW LNIHRVLDRV TQLVQAEVPA GVRIVRDYDP SIPEIFGDAD 
QLIQAILNIV RNAAQALGMH GRIVIRSRID RQVTIGERRH RMAVKIDIID DGPGIKPELL 
NHIFYPMVTG RAEGTGLGLS IAQGLISQHG GLIECSSVPG NTVFSLFLPL EEDHEASVPG 
LGGR