Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | MCA2517 |
Symbol | ispD |
ID | 3104080 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Methylococcus capsulatus str. Bath |
Kingdom | Bacteria |
Replicon accession | NC_002977 |
Strand | + |
Start bp | 2694719 |
End bp | 2695423 |
Gene Length | 705 bp |
Protein Length | 234 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | 637171658 |
Product | 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase |
Protein accession | YP_114928 |
Protein GI | 53803275 |
COG category | [I] Lipid transport and metabolism |
COG ID | [COG1211] 4-diphosphocytidyl-2-methyl-D-erithritol synthase |
TIGRFAM ID | [TIGR00453] 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAGCACTG ACGCGCGTTT CTGGATCGTC GTCCCCGCCG CCGGCGTGGG CAAACGGATG GGGGCCGACA TCCCCAAACA GTACCTGGAC GTGGCGGGCA AACCAGTCCT GCAGCACACG CTCGAACGCC TGCTCTCGGT CCGCCGCGTC ACCGCGGTCA TGGTCGCGCT GGGCGCGAAC GACGAGTTCT GGCCGGAGCT GCCCTGCTCA CGCGAGCCGC GGGTGCTCGC CACGACGGGC GGCAGGGAAC GCGCAGACTC CGTGCTGAGC GCCCTGACCG CCCTGGCCGG CCGGGCCGCG GACGGCGACT GGGTGCTGGT CCACGACGCA GCCCGCCTCT GCGTCACCCG TGACGACGTC GAGCGCCTCA TGGAAACCCT GGAAGACGAC CCCGTGGGCG GCATCCTGGC TCTGCCGGTC ACCGACACCC TCAAGACGGT CGAGAACGGC ACCATCCAGG GCTCCGCAGA CCGCAGTCGC GTCTGGCGCG CCCTCACCCC CCAGATGTTC CGCTACCGAG CGCTCAAAGA GGCGCTGGAA GCAGCGGCAC GACGGGGACT GACGGTGACG GACGAAGCCA GCGCCCTGGA GCTGGCCGGC CTGTCGCCGC GGGTAGTGGA GGGGCGCCCC GACAACATCA AGATCACCCG GCCGGAGGAC CTCCCTTTGG CCGCCTTCTA TCTGGAGCGA CAATGTTTCG AATAG
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Protein sequence | MSTDARFWIV VPAAGVGKRM GADIPKQYLD VAGKPVLQHT LERLLSVRRV TAVMVALGAN DEFWPELPCS REPRVLATTG GRERADSVLS ALTALAGRAA DGDWVLVHDA ARLCVTRDDV ERLMETLEDD PVGGILALPV TDTLKTVENG TIQGSADRSR VWRALTPQMF RYRALKEALE AAARRGLTVT DEASALELAG LSPRVVEGRP DNIKITRPED LPLAAFYLER QCFE
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