Gene MCA2372 details

Gene Information

• Locus tag: MCA2372
• Symbol: rplC
• ID: 3104868
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Methylococcus capsulatus str. Bath
• Kingdom: Bacteria
• Replicon accession: NC_002977
• Strand: -
• Start bp: 2552529
• End bp: 2553164
• Gene Length: 636 bp
• Protein Length: 211 aa
• Translation table: 11
• GC content: 63%
• IMG OID: 637171515
• Product: ribosomal protein L3
• Protein accession: YP_114788
• Protein GI: 53803548
• COG category: [J] Translation, ribosomal structure and biogenesis
• COG ID: [COG0087] Ribosomal protein L3
• TIGRFAM ID: [TIGR03625] 50S ribosomal protein L3, bacterial

Plasmid Coverage information

• Num covering plasmid clones: 15
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGGCCATAG GTTTAGTCGG CCGCAAGTGC GGAATGACCC ATATTTTTAC GGACGCCGGT 
GCCGCCGTTC CGGTGACGGT GATCCATGTC GAGCCCAACC GGGTAGTTCA GGTGAAGACC 
CTGGAGTCAG ACGGCTATCG CGCCATTCAG GTAACCACGG GCAGCAAGAA GCGCTCGCGT 
CTCACGAAAG CGGACGCGGG ACACTACTCG AAGGCCGGCG TAGAAGCGGG GCGGGGGCTG 
TGGGAATTCC GCCTGGAGGA TTCCGATCAG GACTATACGG TCGGTACCGA GCTCGGTGTC 
GGGGTGTTTG CGGAAGGTCA GTTCGTCGAT GCCCGTGCGC GGAGTATCGG CAAGGGCTTC 
GCCGGTGTCG TGAAGCGGCA TAACTTCCGG ACGCAGGACG CGACCCATGG CAACTCGCTG 
TCCCACAGGG CGCCGGGATC CATCGGTCAA AACCAGACGC CCGGCCGCGT GTTCAAGGGT 
AAGAGAATGG CCGGCCACAT GGGGGACAAG AACATCACGG TTCCCAATTT GCGGATCGTC 
GGCATCGATG CCGAGCGGTC CCTGCTCCTC GTGAAGGGAG CGGTGCCCGG TACCAAGGGG 
GCGGACGTGA TCGTCCGCCC GGCTGCGAAG AAATAG 

 

Protein sequence

MAIGLVGRKC GMTHIFTDAG AAVPVTVIHV EPNRVVQVKT LESDGYRAIQ VTTGSKKRSR 
LTKADAGHYS KAGVEAGRGL WEFRLEDSDQ DYTVGTELGV GVFAEGQFVD ARARSIGKGF 
AGVVKRHNFR TQDATHGNSL SHRAPGSIGQ NQTPGRVFKG KRMAGHMGDK NITVPNLRIV 
GIDAERSLLL VKGAVPGTKG ADVIVRPAAK K