Gene MCA2355 details

Gene Information

• Locus tag: MCA2355
• Symbol: rpsE
• ID: 3102700
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Methylococcus capsulatus str. Bath
• Kingdom: Bacteria
• Replicon accession: NC_002977
• Strand: -
• Start bp: 2545040
• End bp: 2545549
• Gene Length: 510 bp
• Protein Length: 169 aa
• Translation table: 11
• GC content: 62%
• IMG OID: 637171498
• Product: 30S ribosomal protein S5
• Protein accession: YP_114771
• Protein GI: 53803434
• COG category: [J] Translation, ribosomal structure and biogenesis
• COG ID: [COG0098] Ribosomal protein S5
• TIGRFAM ID: [TIGR01021] ribosomal protein S5, bacterial/organelle type

Plasmid Coverage information

• Num covering plasmid clones: 10
• Plasmid unclonability p-value: 0.105704
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGGCAAACG TGAATATTCA GGCAGGCGCG GGTGAGGGGC TGCAGGAAAA GCTGGTCGCC 
GTCCGGCGTG TCTCCAAGGT GGTCAAAGGC GGACGTCAGT TCGGATTCAC CGCACTGACC 
GTGGTCGGGG ACGGCAACGG GCGGGTAGGC TTCGGTCTCA GCAAGGCACG CGAGGTGCCG 
GTGGCGATCC AGAAATCGAT GGAGCAGGCG CGCAAGAACA TGCGCAAGGT CGCGCTCAAT 
GGTCAGACGT TGCATCATCC GGTGACCGCA GCGGCAGGCG CGGCCAAGGT GCACATGCAA 
CCGGCTTCGG AGGGTACCGG CATCATTGCC GGGGGGGCCA TGCGCGCCGT GTTCGAAGTT 
GTCGGTGTGC ATAACGTCCT CGCGAAGTGT ATCGGCACCA ACAACCCGAT CAACGTCGTT 
CGTGCGACCA TCAAAGGCTT GACTGCATTG CGAGACCCCA AATCCGTCGC CGCCAAGCGC 
GGGATGACCG TCGAGGAATT GTTGGGGTGA 

 

Protein sequence

MANVNIQAGA GEGLQEKLVA VRRVSKVVKG GRQFGFTALT VVGDGNGRVG FGLSKAREVP 
VAIQKSMEQA RKNMRKVALN GQTLHHPVTA AAGAAKVHMQ PASEGTGIIA GGAMRAVFEV 
VGVHNVLAKC IGTNNPINVV RATIKGLTAL RDPKSVAAKR GMTVEELLG