Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | MCA2132 |
Symbol | |
ID | 3103474 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Methylococcus capsulatus str. Bath |
Kingdom | Bacteria |
Replicon accession | NC_002977 |
Strand | - |
Start bp | 2296643 |
End bp | 2297725 |
Gene Length | 1083 bp |
Protein Length | 360 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 637171282 |
Product | HlyD family secretion protein |
Protein accession | YP_114558 |
Protein GI | 53803788 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0845] Membrane-fusion protein |
TIGRFAM ID | [TIGR01730] RND family efflux transporter, MFP subunit |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.732379 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTCCAACA AAAGTTTCGG CGTTCTGGTC CTGGCCGCTT CGCTGGCTGC CATCGCCGGA TGGTGGCGAC ATACCGCGAC GCCGCCGGCA GCGGTGCCGC CCGCCGATGT GCGGGTGCCG CCGTCGGTCC CGGTGTTCGT GGCGCGGGTC TGGGCTGAGT CCGTCGACGA TGCCATCGAC GCCGTCGGTA CCCTCTTGGC TGACGAGTCG GTCGTGATCC GCCCGGAGGT CCCGGGACGG GTCAAAGCGA TCCGGTTCAC CGAGGGTAAA CCGGTCAGGG CGGGCGAGGT GCTGATCGAG CTCGAGCAGG ACGAATACCG GGCGGCCTTG GCCCAGAGTC TGGCCCAGCA GGAGCTGGAC CAGGCCAACT TCGCGCGCAT GAAGGCGATG CGTGAGCGCG CGCATGTCAG TGCCCAGCAG TACGACGAGG CCGTGTCCAA GCTCAAGTAT TCGAATGCCT TGGTGGAACG GGACCGGGTG CTGCTGCAGA AGACCGTGCT GCGCGCGCCG TTCGACGGCA TCGTCGGTAT CCGGCAGGTC AGCGTCGGGG AATACGTAGA CAAGGGCAAG GCGCTGGTCA ACCTGGAGGC CCTGGACCCG GTCAAGCTGG ATTTCAAGGT GCCGGAGAAG TATGCCGGCA CCGTGACGAG GGGGCTCGCC CTGACTGCCG AGGTGGCGGC TTATCCCGGG CGGGTTTTTT CCGGCCAGGT CTACGCCGTG GATCCGCGCC TCGAGGAGGA AAGCCGCGCC CTGAGGGTGA GGGCGCGCCT GCCGAACCCC GATCGGGCAC TGCGTCCGGG TATGTTCGCG CGTATCCATC TGGCACTGGG CGCGGCGCGC AGGGCACTGT TCGTGCCGGA GTCCGCCCTG GTGGTGAAGG GCAGCTCCGC GTCGGTGTTC CGGGTGGTGG CCGGCAAGGC GGTCGCGACT CCGGTGGCGA TCGGCGCGCG CTACAAGGGC AAGGTCGAAA TCGTGCAGGG GCTCGCCGAG GGTGACAGCG TCGTGACCGA AGGCCAGGTC AAGCTTCGCG ACGGGGCCCC GGTCGCGGTT CCCGAAGCGA AGGAAAATCC GCCCGCCCCA TGA
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Protein sequence | MSNKSFGVLV LAASLAAIAG WWRHTATPPA AVPPADVRVP PSVPVFVARV WAESVDDAID AVGTLLADES VVIRPEVPGR VKAIRFTEGK PVRAGEVLIE LEQDEYRAAL AQSLAQQELD QANFARMKAM RERAHVSAQQ YDEAVSKLKY SNALVERDRV LLQKTVLRAP FDGIVGIRQV SVGEYVDKGK ALVNLEALDP VKLDFKVPEK YAGTVTRGLA LTAEVAAYPG RVFSGQVYAV DPRLEEESRA LRVRARLPNP DRALRPGMFA RIHLALGAAR RALFVPESAL VVKGSSASVF RVVAGKAVAT PVAIGARYKG KVEIVQGLAE GDSVVTEGQV KLRDGAPVAV PEAKENPPAP
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