Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | MCA2110 |
Symbol | |
ID | 3103608 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Methylococcus capsulatus str. Bath |
Kingdom | Bacteria |
Replicon accession | NC_002977 |
Strand | + |
Start bp | 2269135 |
End bp | 2270448 |
Gene Length | 1314 bp |
Protein Length | 437 aa |
Translation table | 11 |
GC content | 58% |
IMG OID | 637171260 |
Product | outer membrane efflux protein |
Protein accession | YP_114536 |
Protein GI | 53803834 |
COG category | [M] Cell wall/membrane/envelope biogenesis [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG1538] Outer membrane protein |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 0.313002 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGGAAATTT CGCTGCACCG GCTAGTCAAC ATTTCATGGC CTAACGAAGC CGGCATACCG TTCCAAAGGA TTTTGGCCCG TCTGGGATTT CTTGCCTGCC TCGGCCTGTG GCTATCGCCA TCCTGGGCCG GCGTGGAACC TTTGACCGAA AGCCAGGTCA TCGGCCTATT CTATGCCCGC AATCTCTCCA TCCTCTCTGC GGAATTGGGA CTGGAAACAG CACAGGCCCA AAAAGTGATC GCTGCCGCCA TACCGAACCC GGAACTGAGC ATCTATCAGC AGGAATGGGC CCCGAATTAT CCCATTTGGC AAAACGGACC GGCCACCTAT GTGGCGGTCA GCCAGCTCAT CGAAACCGCG GGAAAACGCC GACTCCGCAT GGAAAACAGC CTGTTGGGGG AACAAGCCGT GGAAAGCGAG CTGCGCGATG TGATCCGCAC GTTGACTCAG GCTTTACGCC GCGCCTACTA CGGACTCCTG TTGGCGCAGG AAACGATGGA TGCCGCCGTG GAACAGAGCC ATCACGTTCA ACGGTTGGTC GAAGTGCAAC AGAAGCGCTT CGAGGTCGGC GACATTTCGG AGCGGGACCT CACCCGGATC AAAATCGAAG CGCTGAAAGC TCAATCGGAT ATCGACAAAA TTGCCGCCCA GCTCGTCGCG GCGCGATCGC AGTTGGCGGT GTTCCTGGCG TGGCCGGACG ATGCCGGCAG CCTGAGCGTG AAAGACCAGT GGCCGGACGG AAAGTCCTTC GAAGATCTCA AAGACGAGAT GGCGGCGGTG AACGCAGCCT TGGAGCGACG CCCCGACCTG CTGGCGGCCA AGACGCGGTA CGCGCAGGCC AAACAAGGTA TCGACCTCGC CAAGGCCCAA CGCATCCCCG ATATCAAAGT CACAGCCGGC TTCGCCCATG ACCTCGGCAA CTATATACAG AATGGGGCGA CGCTGGGGCT GAGTATCCCC CTGCCCTTGT TTTACAGGCA GGAAGGCGAG ATCGCCCAGG CAGGCATCCG GGCGAACGAC AACGAGTTAC GCGTCAGGCA AACGGAAGTC GCGGTACGTT CCGAAGTGAA CACCGCCTTC GCCGCATGGA TCTCGGCAAA CACCGTCGTT AAACGCTTCG AGACCGAGAT CATGCAAAAG GCAAAACACA TCCGGGATTC GGCCGAAATC GCCTATACCA ATGGCAGCAC CGATATCATC GACCTCATCC AGGCACAGCG TGATTACCGG AATACGATCA TGGATTACTA CCAAGCCCAG GCCAACCGCG CCTACGCCTA TGCCGACCTA AAAATGGCCA TCGGCGCGGA GTGA
|
Protein sequence | MEISLHRLVN ISWPNEAGIP FQRILARLGF LACLGLWLSP SWAGVEPLTE SQVIGLFYAR NLSILSAELG LETAQAQKVI AAAIPNPELS IYQQEWAPNY PIWQNGPATY VAVSQLIETA GKRRLRMENS LLGEQAVESE LRDVIRTLTQ ALRRAYYGLL LAQETMDAAV EQSHHVQRLV EVQQKRFEVG DISERDLTRI KIEALKAQSD IDKIAAQLVA ARSQLAVFLA WPDDAGSLSV KDQWPDGKSF EDLKDEMAAV NAALERRPDL LAAKTRYAQA KQGIDLAKAQ RIPDIKVTAG FAHDLGNYIQ NGATLGLSIP LPLFYRQEGE IAQAGIRAND NELRVRQTEV AVRSEVNTAF AAWISANTVV KRFETEIMQK AKHIRDSAEI AYTNGSTDII DLIQAQRDYR NTIMDYYQAQ ANRAYAYADL KMAIGAE
|
| |