Gene MCA2047 details

Gene Information

• Locus tag: MCA2047
• Symbol: speA
• ID: 3104170
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Methylococcus capsulatus str. Bath
• Kingdom: Bacteria
• Replicon accession: NC_002977
• Strand: +
• Start bp: 2200054
• End bp: 2201931
• Gene Length: 1878 bp
• Protein Length: 625 aa
• Translation table: 11
• GC content: 63%
• IMG OID: 637171201
• Product: arginine decarboxylase
• Protein accession: YP_114478
• Protein GI: 53803634
• COG category: [E] Amino acid transport and metabolism
• COG ID: [COG1166] Arginine decarboxylase (spermidine biosynthesis)
• TIGRFAM ID: [TIGR01273] arginine decarboxylase, biosynthetic

Plasmid Coverage information

• Num covering plasmid clones: 17
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGACAAAAG CGAACTGGAC GCTGAGCGAC GCCCGCGACA CTTACGCCAT CGAGCACTGG 
AGCGATGGGT ATTTCAACAT CGCGCCGGAG GGCGAAGTCG TGGTCTGTCC GCAGCGGGGA 
AGCGTCGAGG GAGGCGTAAG CATCGCCGCC ATTGCCCGCG GCGTCCGTGC CGAGGGATTG 
TCCTTGCCCG TGCTGATGCG CTTTCCCCAC ATCCTGCACG ACCGGGTCCG CCTTCTGACG 
TCGGCGTTCG GCAAGGCGCG GGCCGCCTAC CACTACGGAG CCGGCTATAC GCCGGTGTAC 
CCGATCAAAG TCAACCAGCA GCGCAACGTC ATCGAGAACA TTCTCCGCGC CGGCGGCGTC 
GGCCTCGAGG CCGGCAGCAA ATCGGAACTG CTCGCCATCC TTGCCCTGGC GGAGTCCGGC 
ACCATCATCT GCAATGGCTA CAAGGATCGC GCCTACATCC GGCTGGCCCT GATCGGCAGC 
CGGTTGGGGC TGCGGGTCTT CATCGTGGTC GAAAAACTGT CTGAACTCGA ACTGGTGGTG 
AGCGAATCCG AAGCGCTCGG CATCGCCCCG CAGCTCGGTG TACGGATCAG GCTCTCCAGC 
ATCAGCGCCG GCAAATGGCA GAATAGCGGC GGCGAAAAAT CGAAATTCGG CCTGCATGCG 
GGTGAAATCC TGAAGTTCCT CAAACGGCTG GAGCGCGCCG GAGGACTCGG CTGGGTACGG 
CTGATGCATT TCCACATGGG ATCCCAGGTG GCCAACATCA ATGACGTCAA GACCGCCCTG 
CGCGAAGCCA GCCGCTACTA TGCGGAACTA CGGCGGCTGG GGGCGCCGGT CGATCATGTC 
GACGTCGGCG GCGGCCTCGG CATCGACTAC GAAGGCACGC ATTCGGTCAG CGACTGCTCG 
ATCAACTACA GCGTGGATGA ATACGCCCAC AGCATCGTGC GGGCTTTCTC CGAACTCTGT 
GCCGAACAGG GACTGCCCCA GCCGGACCTG ATCACCGAAG CCGGTCGGGC GATGAGCGCG 
CACCATGCCG TGCTGGTAAC CAACGTCGTC GACATCGAGG CGGCCACCTA TGACGCCAGC 
CCGGTCTCCG CCTCGGTGGC CCAGCCATTG AAGGACCTGG AGGACCTGCT CCGCCGGGTG 
GACAGCGAAT CGGTACTGGG CATCTACCAC GATGCCGAGT TCGACCTCGC CGAAACCCGG 
ACCATGTACG TTCAAGGCAA GATCGGCCTG GACCAGTTGG CGGAAGCCGA ACGGCTCCAC 
GCCACCCTCT GCCGCGAAGT GCAGCAGCGT CTCGACATCC GGCTGAGGGC CCACCGGGCC 
GTGCTGGACG AGCTCAACGA GCGCCTGGCC GACAAGCTGT TCTGCAATTT CTCGGTCTTC 
CAGTCGATTC CCGATGCCTG GGCGATCGAT CAGATCTTCC CGGTCATGCC GCTGCAACGG 
CTTGGCGAAG AACCCACCCG CCGCGCCGTG ATCCAGGACA TGACCTGCGA CTCCGACGGA 
CGGATCAACG CCTACATCGA CCGGCAGAGC ATCGAGAACA CCCTGCGTAT GCATGCGCCG 
GCCCCCGGCG AACCCTACCT GATAGGCTTC TTCCTGGTCG GCGCCTACCA GGAAATCCTG 
GGCGACATGC ACAATCTGTT CGGGGACACC CACTCGGTGG ATGTCGAACT GGACGGCGCG 
GGCGGTTATA CCTTCACCCA CACCCGGAGG GGCGACGGCG CCGACGATCT GCTGCGCTAT 
GTCCACATCG ATCCTGACGA ACTGGAACGT TCCTACCGCA AGAAGCTGAT CGAAGCCGAC 
ATCCCGATGC ACCAGCGCAA GCAGTACGAA AGCGAGCTGA TCGCGGGACT CAGCAACTAC 
ACCTACCTGG AGGAATGA 

 

Protein sequence

MTKANWTLSD ARDTYAIEHW SDGYFNIAPE GEVVVCPQRG SVEGGVSIAA IARGVRAEGL 
SLPVLMRFPH ILHDRVRLLT SAFGKARAAY HYGAGYTPVY PIKVNQQRNV IENILRAGGV 
GLEAGSKSEL LAILALAESG TIICNGYKDR AYIRLALIGS RLGLRVFIVV EKLSELELVV 
SESEALGIAP QLGVRIRLSS ISAGKWQNSG GEKSKFGLHA GEILKFLKRL ERAGGLGWVR 
LMHFHMGSQV ANINDVKTAL REASRYYAEL RRLGAPVDHV DVGGGLGIDY EGTHSVSDCS 
INYSVDEYAH SIVRAFSELC AEQGLPQPDL ITEAGRAMSA HHAVLVTNVV DIEAATYDAS 
PVSASVAQPL KDLEDLLRRV DSESVLGIYH DAEFDLAETR TMYVQGKIGL DQLAEAERLH 
ATLCREVQQR LDIRLRAHRA VLDELNERLA DKLFCNFSVF QSIPDAWAID QIFPVMPLQR 
LGEEPTRRAV IQDMTCDSDG RINAYIDRQS IENTLRMHAP APGEPYLIGF FLVGAYQEIL 
GDMHNLFGDT HSVDVELDGA GGYTFTHTRR GDGADDLLRY VHIDPDELER SYRKKLIEAD 
IPMHQRKQYE SELIAGLSNY TYLEE