Gene MCA2018 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMCA2018 
Symbol 
ID3103998 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethylococcus capsulatus str. Bath 
KingdomBacteria 
Replicon accessionNC_002977 
Strand+ 
Start bp2166530 
End bp2167192 
Gene Length663 bp 
Protein Length220 aa 
Translation table11 
GC content66% 
IMG OID637171173 
Producthypothetical protein 
Protein accessionYP_114450 
Protein GI53803692 
COG category[S] Function unknown 
COG ID[COG3165] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.987101 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCGGGAA TGCCCAAACT CCTGCTGGCG GCCGCCCTGC GCGGTGCCAT GGAGCAAGCG 
CTGTCGCGCT ATGTCACGTC GAGCCCCTCC AGCCGAGCAC GCCTGGAAGC CCTGGCCGGC 
AAGACCATCG CCCTGGTGCT GACGCCGCCC GGCATCGGCA TCCTGTTGTG CCCCACTCCC 
GAGGGTATCC AGGTGTTGGG GGAAAGCACC GGCACGCCCG ATGCCGTGAT TGCGGGTTCT 
CCCCTCACGC TGGCGCGGGC GGCATTGAGC CGCGCCCGCA TCGGTCCGGG CACGACCGGA 
CCGCTGGTGC TGGAAGGTGA CACGGAAACC GCACGGAAAT TTTCCACATT ACTGAAAGAC 
CTGGACATCC CTTGGGAGGC GATGTTCGCA CGCTATCTGG GACCAACGAT GGCCCGGAAC 
ATCACCGGAG CCGGTCGGAC GCTCCGCCAC TGGAGCACCG ACCTCGGCAC CACCCTCCGG 
TTGAATACCC GCGAACTGCT GCAGGAGGAA ACCCGGATCG TCCCCGCCGA TCCTGAAGCC 
GAGGCGCTGT ACACGGCAAT CGACCATCTG CGCGATGGCA TCGCAAGGCT GGAAGCCCGT 
CTCGTCCGCA TCGAGAACAA GCAGCTCACC GCTCCCGGCC AGCCTCAAGC GAAAACGCCG 
TGA
 
Protein sequence
MAGMPKLLLA AALRGAMEQA LSRYVTSSPS SRARLEALAG KTIALVLTPP GIGILLCPTP 
EGIQVLGEST GTPDAVIAGS PLTLARAALS RARIGPGTTG PLVLEGDTET ARKFSTLLKD 
LDIPWEAMFA RYLGPTMARN ITGAGRTLRH WSTDLGTTLR LNTRELLQEE TRIVPADPEA 
EALYTAIDHL RDGIARLEAR LVRIENKQLT APGQPQAKTP