Gene MCA2014 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMCA2014 
SymbolhslV 
ID3103860 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethylococcus capsulatus str. Bath 
KingdomBacteria 
Replicon accessionNC_002977 
Strand
Start bp2163509 
End bp2164072 
Gene Length564 bp 
Protein Length187 aa 
Translation table11 
GC content62% 
IMG OID637171169 
ProductATP-dependent protease peptidase subunit 
Protein accessionYP_114446 
Protein GI53803704 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG5405] ATP-dependent protease HslVU (ClpYQ), peptidase subunit 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGGAAAATT TTCACGGCAC GACCATCGTT TCCGTCCGCC GGGGCGACCA GGTGGTGATC 
GGCGGCGACG GCCAGGTCAC CCTCGGCGAC ACGGTCATGA AAGGCAATGC CAGGAAGGTG
AGACGCCTCT ACAACGGACG GGTATTGGCC GGTTTCGCCG GCGCCACGGC GGACGCCTTC
ACCCTGTTCG AACGCTTCGA GAGCCAGTTG GAAAAGCACC GCGGCAACCT CACCAAAGCC
GCCGTGGAAC TGGTCAAGGA CTGGCGCACC GACCGCATGC TGCGCCGTCT GGAGGCCCTG
CTGGCGATCG CTGACGACAA GGCTTCGCTG ATCATTTCGG GCAACGGCGA CGTGATCGAG
CCGGAAAACG GACTGATCGC GATCGGTTCC GGCGGTCCCT TCGCCCAGTC GGCCGCACGC
GCGCTGCTGG AAAACACCGA ACTCGGCGCC CGCGACATCG TCGAGAAGTC CTTGATCATC
GCCGCCGACA TCTGTATCTA CACCAACCGC AATCTGACCA TCGAAGAACT CGAGACCGGC
CGGAATTTCC CTAATCTAGC ATGA
 
Protein sequence
MENFHGTTIV SVRRGDQVVI GGDGQVTLGD TVMKGNARKV RRLYNGRVLA GFAGATADAF 
TLFERFESQL EKHRGNLTKA AVELVKDWRT DRMLRRLEAL LAIADDKASL IISGNGDVIE
PENGLIAIGS GGPFAQSAAR ALLENTELGA RDIVEKSLII AADICIYTNR NLTIEELETG
RNFPNLA