Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | MCA1971 |
Symbol | serS |
ID | 3104615 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Methylococcus capsulatus str. Bath |
Kingdom | Bacteria |
Replicon accession | NC_002977 |
Strand | - |
Start bp | 2121755 |
End bp | 2123038 |
Gene Length | 1284 bp |
Protein Length | 427 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 637171125 |
Product | seryl-tRNA synthetase |
Protein accession | YP_114403 |
Protein GI | 53803953 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0172] Seryl-tRNA synthetase |
TIGRFAM ID | [TIGR00414] seryl-tRNA synthetase |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 0.140828 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGTTGGATC CACGTTTATT CCGCACCCAA CTGGAAGAGA CCGCACGGCA GCTCGGTCGC CGCGGCTTCG TTCTGGACAC CGCTGCCTTC GGTGCGCTCG AAGAGCGCCG CAAGGCCCTG CAGGTGGAAA CCCAGAACTT GCAGAACGAG CGTAACAGCC GTTCCAGGTC CATCGGCCAG GCCAAGGCGC GGGGGGAAGA CATCGAGCCC TTGCTGGCAG CCGTGCAGGG GCTGGGGGAG CGGTTGAAGG AAAACGAGGC TGAATTGGCG TCGATCCAGG AACGCATGGA AGCCCTGCTG CTCGGCGTGC CCAATCTCCT GGACACCGAC GTGCCCGAGG GGCGCAGCGA GGCTGACAAC GTCGAGATCC GGCGCTGGGG CGAGCCGCCG CAATTCGACT TCGAACCCAA GGACCACGTC GATCTAGCCG TCGGTCTGGG CTGCGCGGAT TTCGAAGCGG CCGCCAAACT GAGCGGTTCG CGTTTCGTGG TCCTGACCGG GCCACTGGCA CGGCTGCAGC GTGCCCTGAC GCAGTTCATG CTCGATATTC ACACCGGCGA GCATGGCTAC ATCGAAACCT ACGTGCCGTT CCTGGTCAAC GCCGACAGCC TGCGCGGCAC CGGTCAGCTC CCGAAGTTCG AGGAGGACCT GTTCAAGGTC CAGCACGAGC CGGTGTTCTA TCTGATTCCG ACCGCCGAGG TCCCGGTCAC CAATCTGGTG CGGGACGAGA TCGTGGAGGA AGAACGCCTG CCGCTGAAAT ACGTCTGTCA TACACCGTGT TTCCGCAGCG AAGCCGGCTC CTATGGCCGT GACGTGCGCG GACTGATCCG GCAGCACCAG TTCGAGAAGG TGGAACTGGT CCAGATCGTC CGCCCCGAAG ACTCGCGCGA GGCCCACGAG GCATTGACCC GCCACGCCGA AGTCATCCTG GAGCGGCTCG GTCTGCCCTA CCGGCGTGTG CTGCTGTGTG CAGGAGACAC CGGCTTTTCC TCCGCCAAGA CCTACGACCT GGAAGTCTGG CTACCGGGCC AGCAGTCCTA CCGGGAAATC TCGTCTTGCA GCAATTTCCG CGACTTTCAG GCTCGCCGGC TCCAAGCGCG TTGGCGCAAT CCAGAAACCG GCAAACCGGA GCTGGTCCAT ACGCTCAACG GTTCGGGACT CGCCGTCGGA CGTACCCTGG TCGCGGTCCT GGAGAACTGC CAGGATGAAG CCGGGCGGAT CCGGGTGCCG GAAGTCCTGG TGCCGTACAT GGGCGGCGTG AACTTGATCG GCCCCGCCGC ATGA
|
Protein sequence | MLDPRLFRTQ LEETARQLGR RGFVLDTAAF GALEERRKAL QVETQNLQNE RNSRSRSIGQ AKARGEDIEP LLAAVQGLGE RLKENEAELA SIQERMEALL LGVPNLLDTD VPEGRSEADN VEIRRWGEPP QFDFEPKDHV DLAVGLGCAD FEAAAKLSGS RFVVLTGPLA RLQRALTQFM LDIHTGEHGY IETYVPFLVN ADSLRGTGQL PKFEEDLFKV QHEPVFYLIP TAEVPVTNLV RDEIVEEERL PLKYVCHTPC FRSEAGSYGR DVRGLIRQHQ FEKVELVQIV RPEDSREAHE ALTRHAEVIL ERLGLPYRRV LLCAGDTGFS SAKTYDLEVW LPGQQSYREI SSCSNFRDFQ ARRLQARWRN PETGKPELVH TLNGSGLAVG RTLVAVLENC QDEAGRIRVP EVLVPYMGGV NLIGPAA
|
| |