| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | MCA1969 |
|---|
| Symbol | |
|---|
| ID | 3102215 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methylococcus capsulatus str. Bath |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_002977 |
|---|
| Strand | - |
|---|
| Start bp | 2120124 |
|---|
| End bp | 2120951 |
|---|
| Gene Length | 828 bp |
|---|
| Protein Length | 275 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 62% |
|---|
| IMG OID | 637171124 |
|---|
| Product | ABC transporter, ATP-binding protein |
|---|
| Protein accession | YP_114402 |
|---|
| Protein GI | 53803963 |
|---|
| COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
|---|
| COG ID | [COG1127] ABC-type transport system involved in resistance to organic solvents, ATPase component |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 11 |
|---|
| Plasmid unclonability p-value | 0.309748 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGACCTTCC AGCCTTCGGA CACCCCGGCG CTCGTTTCCA TCCGCGGCCT GAGTTTTTCC
CGCAATGGTC GCAAGATTTT CGACAACATC GACCTCGACA TTCCCCGCGG CAAGATCACC
GCGATCATGG GGCCCAGCGG CACCGGCAAA ACCACGCTGC TCAGGCTCGT CGGCGGCCAG
CTCCGTCCCG ACAGCGGTAC CGTCCGGGTG GCCGGGATCA ACGTTCACCG GCTGGGGCTG
GATGAACTTT ATGCCTTGCG CAAGCGCATG GGCATGCTGT TCCAAAGTGG AGCGTTGCTA
ACCGATCTTT CGGTCTACGA GAACGTCGCT TTCCCCTTGC GCGAGCACAC CCGACTGCCG
GAGTCCATGA TCCGCACCCT GGTGCTGATG AAGCTCGAGG CGGTGGGCTT GCGCGGCGCG
CGCGATCTGA TGCCGGCTCA ACTTTCGGGC GGCATGGCTC GGCGAGTCGC GCTGGCGCGA
GCCATCGTGC TCGATCCCAT GATGATCATG TACGACGAGC CGTTCACCGG CCAGGATCCC
ATTTCGATGG GGGTGCTGGT GCAACTGATC CACGATCTCA ACCATGGTCT GGGGCTGACC
AGTATCGTGG TGTCGCATGA CGTGCAAGAG ACCGCGTCCA TCGCGGACTA TGTTTACTTG
ATCTCGGGCG GCAAAGTGGT CGGGCGCGGC ACGCCGGCGG AGCTGGCGAG GTCGGATTCA
CCCTGGATCC GGCAGTTCAT GGACGGGTTG CCCGACGGTC CGGTCCATTT CCATTATCCT
TCCAAGGATT ACGCGAGCGA CCTCTTGGGT TTCGTGGCAA GCCGATGA
|
|---|
| Protein sequence | MTFQPSDTPA LVSIRGLSFS RNGRKIFDNI DLDIPRGKIT AIMGPSGTGK TTLLRLVGGQ
LRPDSGTVRV AGINVHRLGL DELYALRKRM GMLFQSGALL TDLSVYENVA FPLREHTRLP
ESMIRTLVLM KLEAVGLRGA RDLMPAQLSG GMARRVALAR AIVLDPMMIM YDEPFTGQDP
ISMGVLVQLI HDLNHGLGLT SIVVSHDVQE TASIADYVYL ISGGKVVGRG TPAELARSDS
PWIRQFMDGL PDGPVHFHYP SKDYASDLLG FVASR
|
|---|
| |