Gene MCA1957 details

Gene Information

• Locus tag: MCA1957
• ID: 3102397
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Methylococcus capsulatus str. Bath
• Kingdom: Bacteria
• Replicon accession: NC_002977
• Strand: +
• Start bp: 2109113
• End bp: 2111029
• Gene Length: 1917 bp
• Protein Length: 638 aa
• Translation table: 11
• GC content: 62%
• IMG OID: 637171112
• Product: TonB-dependent receptor, putative
• Protein accession: YP_114390
• Protein GI: 53803981
• COG category: [H] Coenzyme transport and metabolism
• COG ID: [COG4206] Outer membrane cobalamin receptor protein
• TIGRFAM ID: [TIGR01779] TonB-dependent vitamin B12 receptor

Plasmid Coverage information

• Num covering plasmid clones: 4
• Plasmid unclonability p-value: 0.0488183
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

GTGCATGGCC ATCCCATGCA GAGGTCCATC GTGAAATCCC GGCTCTTCCG CCTTTCCCTG 
ACGGCGCTCG GCGCCACCCT TTCCCTTGAC ACACCGGCCA TCGACAGCGA TCCCGCGGAA 
CTCGATACCG TGGTGGTCAC GGCCACCCGC ACCGAAACGC CGAGCCGGCA GGTCGGCAGC 
TCCGTGACCG TCCTGACCGC CGAGGACATC AAGGAGCGGG GCGTCTATTC GGTCGACCAG 
ATCCTGCGCA TCGTTCCCGG TCTCGACATG GCCCAGAGCG GCGGTCCGGG ACGGGAAACC 
TCGGTGTTCC TGCGCGGCGC CAACTCCGGC CAGACCATCG TCCTGATCGA CTGGACCGAA 
ATGAACGACC CCTCGTCGGC CAACGCCGGG TTCGACTTCG CCAACTTGAC CATCGACAAC 
ATCGAGCGCA TCGAAATCCT GCGCGGCGCG GCGAGCTCGA TCTATGGTTC CGAAGCCATC 
GGCGGAGTAA TCAACATCAT CACCAAGAAG GGCTCTGGCA AACCGAGGCT GAAAACCAGC 
GTCGACGGCG GTAGCTACGA CACTTGGCGA GTCATGGGCG ACCTCGCCGG CGGCGATCCC 
CGCTTCAACT ACAGCCTCAC CGCCAGTCAC CGCGAGGTCC GCGGCTTTTC CGCCGCCGAC 
CAGCACTTCG GCGCATCCGA GCGCGACGGG TACCGCAACA CCACCGTCAG CACCCGCATC 
GGCGGCACAC CCGCCGACGA CCTGGAGCTG GGCTGGAGCC TGCGCTACGA CGACGGCTTC 
ACCAAGCTGG ACAATTACGA CTTCCTGCTC CGGCGACCCG TGGATGACCC CAACTATACC 
GGCAACGCCA ACGAGCTCTA TACCCGCGGC TTCGGCACCC TCAAGCTCTT CGACAGCCTG 
TGGGAGCAGA CGGTCGGAAT GGCCTACACC CGTGTGGACC GCCAGTACGA CAATGCGGCC 
AACCCGGGCG ATCCCTTCCC ATTCCGCGCC GCCTACCTGG GCGAAAAGAT CAAGGGCAAC 
TGGCTCAATA CGCTGCGTCC GCACGAAACC AACACCGTAT CCTTCGGCAT CGACGATGAA 
GAGGACACCA TGACCATCAT GGAACCCTCG CAGTTCGTCG AGGGCTACAA CACCCTCGGG 
TATTTTCTCG AAGACCAGCT CAACCCCTTC GACGGGTGGT CCACCACGGC GAACGTACGG 
CATGATCACA ACAATTCCGT CGGCGGCAAG ACGACCTGGC GGGTCAGTCA AGTCTGGACC 
CTGCCGCTTC TGGAAACCCG CTTGAAGGCC AACTACGGAA CCGGCTTCAA GGTGCCGGCG 
CTCGCCCAGC TCTACGACCC CTTGTACGAC ACAGGGAATC CGAACCTTCG TCCTGAAACC 
AGCACCAACT GGGACATCGG CGTCGAACAG CCGTTCGGGC AAGCCGTGAG AGGCAATGCT 
GGCATCGTGT ATTTCAACAA CCGATTCAAA GACCTGATCC AGTTCGATCC GGTCGCGTTC 
CGCATGGAAA ACGTCAACAA TGCCACGGCC GAAGGGGTGG AAACCTATGT CGAACTGAAT 
CCGCTGGCCG GCCTGGATCT GCGGGGCACC TATACCTACA TGGACAGCCG GGACCAGGAT 
ACCGGAACCC CGCTCTATCA AAGAGCCCGG AACAAAGGAG CGTTCGACCT CAACTACCGT 
TTCGACAACG GCGCCAACGT CCACGCCAAC ATCGTGATGG TCGGCCCCCG GCTCAGCACG 
GGAAACCGGA CCGCAGCCGG TTATGTCATC CTCGATCTTG CCGCATCCTA TGAAGTGAGC 
GACCGACTGT CGCTGTGGAC CCGGGTGGAC AACGTGCTCA ACAAGTGGCA CGAAGAGGTC 
TACGGCTACG GAACCACCGG GGCCGCGGCC TACGGCGGCC TCACTCTGAC CTATTAG 

 

Protein sequence

MHGHPMQRSI VKSRLFRLSL TALGATLSLD TPAIDSDPAE LDTVVVTATR TETPSRQVGS 
SVTVLTAEDI KERGVYSVDQ ILRIVPGLDM AQSGGPGRET SVFLRGANSG QTIVLIDWTE 
MNDPSSANAG FDFANLTIDN IERIEILRGA ASSIYGSEAI GGVINIITKK GSGKPRLKTS 
VDGGSYDTWR VMGDLAGGDP RFNYSLTASH REVRGFSAAD QHFGASERDG YRNTTVSTRI 
GGTPADDLEL GWSLRYDDGF TKLDNYDFLL RRPVDDPNYT GNANELYTRG FGTLKLFDSL 
WEQTVGMAYT RVDRQYDNAA NPGDPFPFRA AYLGEKIKGN WLNTLRPHET NTVSFGIDDE 
EDTMTIMEPS QFVEGYNTLG YFLEDQLNPF DGWSTTANVR HDHNNSVGGK TTWRVSQVWT 
LPLLETRLKA NYGTGFKVPA LAQLYDPLYD TGNPNLRPET STNWDIGVEQ PFGQAVRGNA 
GIVYFNNRFK DLIQFDPVAF RMENVNNATA EGVETYVELN PLAGLDLRGT YTYMDSRDQD 
TGTPLYQRAR NKGAFDLNYR FDNGANVHAN IVMVGPRLST GNRTAAGYVI LDLAASYEVS 
DRLSLWTRVD NVLNKWHEEV YGYGTTGAAA YGGLTLTY