Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | MCA1941 |
Symbol | |
ID | 3102722 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Methylococcus capsulatus str. Bath |
Kingdom | Bacteria |
Replicon accession | NC_002977 |
Strand | + |
Start bp | 2089178 |
End bp | 2090482 |
Gene Length | 1305 bp |
Protein Length | 434 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 637171096 |
Product | sugar ABC transporter, sugar-binding protein, putative |
Protein accession | YP_114374 |
Protein GI | 53804010 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG1653] ABC-type sugar transport system, periplasmic component |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGAGCCTTT CGTTTTCACC TCGGAATTTC AGACTCACCG GTATGGCCAT GAACTTTCGT TTGTCGCTTG TCATCCTGTC GTCCTGCCTC TGGCTTCTGA ACGCTTGCCA GCCGGGCCAT GACGAAAGTT TGACGTTCTG GGCATTCGGC AGCGAGGGAG AGGTGGCCCA TGAGCTCGCC AGCGAGTTCG AGAGGCTGAA TCCGGATGTC CGCGTCGAGG TCCAGCCAAT CCCCTGGAAC GCCGCCCACG AAAAGCTGCT GACGGCTTAC GCCGGCGGCA GCCTGCCCGA CGTGTTCCAG CTCGGCAATA CCTGGATAGC GGAATTCCAG GCATTGCGGG CACTGGACGA CGTCACCCGC CGTTTCGGGA ACACCGGACA GAAGGGCGAC TACTTCGAAG GAGCGCTGGA CGCGACCTTC GTCGAGGGCC GGATGTGGGC GGTCCCCTGG TATGTCGACA CGCGCATTCT GTTTTACCGG CGCGACTTGC TGGAAGCGGT GGGGATCACA TCGCCACCCC GGCGCTGGGA CGGCTGGTTC GAGGCGCTGT CCCGCTTCCA TGAGCGCACC GGGGCTTTCG GGCTGTTCCT TGCCATCGAC GCCTGGGAGG TTCCCGTCGT TTTCGCGATG CAGCACGGAG CGGCCCTGCT GAAGGATGGG GACCGCCATG GCGATTTCCT CCATCCCGGT TTCCGGGCAG CGTTCGATGC CTATCTGGGC TGGTTCCGGG AAAAACTGGC GCCGGCGGAA AGCTCCGGCC AAGTGGCCAA TCTCTATCGG GAATTCGAAC AGGGCTATTT CGCTGCGCTC ATCACCGGCC CGTGGAATCT CGGCGAGTTC CGGCGGCGGC TGCGCGACCT CGACGCTGCC GCCTGGGACA CCGCGCCCTT GCCGTCTTTC GACGATTCCT ATCCCGGCAT CTCCCTGGCC GGGGGAGGCA GTCTGGCGCT GGCCTACGCG TCCAGACACA AGGATGCGGC CTGGCGGCTG ATCGAGTTCC TCACCGAGCC TCGGCAGCAG GTTTACCTGT ACCGTCTCAC CGGCGATCTG CCACCGGGAC GGACCGCTTG GAGCGATCCC GCTCTGGCAG GCGACCGCAA GGCACGGTCT TTCCGCAGCC AGATGGAACG TATCGCGCCC TTGCCGAAGA TTCCCGAGTG GGAGCGGATT GCCAGCCGGA TCGCGGCCTG CGCCGAGCGG GCGGTACGGG GCGAAGTACC CCCGCAGGCG GCACTGGAGG CATTGAACAG GGAAGTGGAC CGGATTCTGG AAAAACGCCG CTGGCTGCTG GAGCGGGGGT TGTGA
|
Protein sequence | MSLSFSPRNF RLTGMAMNFR LSLVILSSCL WLLNACQPGH DESLTFWAFG SEGEVAHELA SEFERLNPDV RVEVQPIPWN AAHEKLLTAY AGGSLPDVFQ LGNTWIAEFQ ALRALDDVTR RFGNTGQKGD YFEGALDATF VEGRMWAVPW YVDTRILFYR RDLLEAVGIT SPPRRWDGWF EALSRFHERT GAFGLFLAID AWEVPVVFAM QHGAALLKDG DRHGDFLHPG FRAAFDAYLG WFREKLAPAE SSGQVANLYR EFEQGYFAAL ITGPWNLGEF RRRLRDLDAA AWDTAPLPSF DDSYPGISLA GGGSLALAYA SRHKDAAWRL IEFLTEPRQQ VYLYRLTGDL PPGRTAWSDP ALAGDRKARS FRSQMERIAP LPKIPEWERI ASRIAACAER AVRGEVPPQA ALEALNREVD RILEKRRWLL ERGL
|
| |