Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | MCA1924 |
Symbol | |
ID | 3103319 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Methylococcus capsulatus str. Bath |
Kingdom | Bacteria |
Replicon accession | NC_002977 |
Strand | - |
Start bp | 2070513 |
End bp | 2071328 |
Gene Length | 816 bp |
Protein Length | 271 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 637171079 |
Product | sugar ABC transporter, permease protein |
Protein accession | YP_114357 |
Protein GI | 53804043 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG0395] ABC-type sugar transport system, permease component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.444482 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCGGTATC CGGCTCTGAT TTTCTACCTC GTTCTGTCGC TGGCGACGGC GGCGACCCTG TTTCCGCTGG TCTGGATGGT TTCGGTGTCG TTGATGCCAC CGGCCGAAGC CATGCGCTAT CCGCCCCCGC TCTGGCCCGA GGCCCCGACG CTGGAGCATT ACCGGACATT GTTCGATCGC CTGGCGATTG CGCGGTATGC GTTGAACAGC CTGGTGCTGG CCGGTGCTGT CACGGCTCCG TCGGTGCTGG TCAACGCAGC CGCCGGCTAC GCCTTCGCCC GCCTGCCGTT CGTGGGGCGG GATGCGCTAT TCCGGTTGTT GATGACCTTC ATGGTCATCC CGGGGCAGGT CGCCATGCTG CCCCTGTTCC TGCTGCTGAA GCAGCTCGGC CTGATCAACA CCTATGCCGG TGTGATCGTT CCCGGGTTGG CCAGCATTTT CGGGATATTC CTGGTGCGGC AGTATGCGCT GTCACTGCCA CAAAGCCTGT TCGATGCGGC GAGGCTGGAG GGGGCCGGTG AGCTGCGCAT CTTCTGGTCG CTGGTGCTGC CCCTGTGCCG GCCGATTTTG ATTACGCTGG CGGTCTTCAC CTTCCTCGGG AGCTGGAACG ATTTCCTCTG GCCCCTGATC GTTCTGACCG ACCGTCGTCT TCAAACCCTC CCGGTGGCGC TGGCTGCCCT GATGGGGGAG CATGCGGTGG ACACCGAGCT GATGATGTCG GGTGCAGCCC TCACGGTGGT GCCGGTGATC GTTCTGTTCC TGGCAGCGCA GCGATACTAC CTCGGCGGGC TGATGCAGGG CGGCGTCAAG GGATAG
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Protein sequence | MRYPALIFYL VLSLATAATL FPLVWMVSVS LMPPAEAMRY PPPLWPEAPT LEHYRTLFDR LAIARYALNS LVLAGAVTAP SVLVNAAAGY AFARLPFVGR DALFRLLMTF MVIPGQVAML PLFLLLKQLG LINTYAGVIV PGLASIFGIF LVRQYALSLP QSLFDAARLE GAGELRIFWS LVLPLCRPIL ITLAVFTFLG SWNDFLWPLI VLTDRRLQTL PVALAALMGE HAVDTELMMS GAALTVVPVI VLFLAAQRYY LGGLMQGGVK G
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