Gene MCA1818 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMCA1818 
SymbolxseA 
ID3104617 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethylococcus capsulatus str. Bath 
KingdomBacteria 
Replicon accessionNC_002977 
Strand
Start bp1949431 
End bp1950834 
Gene Length1404 bp 
Protein Length467 aa 
Translation table11 
GC content67% 
IMG OID637170978 
Productexodeoxyribonuclease VII, large subunit 
Protein accessionYP_114256 
Protein GI53804093 
COG category[L] Replication, recombination and repair 
COG ID[COG1570] Exonuclease VII, large subunit 
TIGRFAM ID[TIGR00237] exodeoxyribonuclease VII, large subunit 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGAACCTGC GCTCATCGCC GGATGGCCGG CCCGAATTCG TCTATACAGT CTCGCGTCTC 
AACCGCGAAG CCCGTATCAC CCTGTCCAGC CATTTCGGCA CGCTCTGGGT GGAGGGCGAA
GTGTCCAATC TGGCTGCACC GGCCTCGGGC CACCTCTACT TCACCCTGAA GGACGCCGAA
GCCCAGGTCC GCTGCGCCAT GTTCCGCAGC TCCGGGCGTC TGCTCGGCTT CAAACCCACC
AATGGCGATC ACGTTCTGGC CCGCGCCCAG GTAGGGTTGT ACGAACCCCG CGGCGACTAC
CAGTTGATCG TAGACCTCCT GGAGGAGGCC GGCGACGGTG TCCTCCACCG CGCCTTCGAA
GCGCTGAAGA AACGCCTGGA CGCCGAAGGA CTGTTCGATC CGGCCCGCAA GAAGCCCATC
CCCCGCTTCC CCACCTGCAT CGGTGTCGTC ACCTCGCCCA CGGGCGCCGC GATCCGCGAC
ATCCTCACCG TGCTGGCGCG GCGCTACCCC GCGGCTTCGG TCATCATTTT TCCCGCCAAG
GTCCAGGGCA GCGAGGCGCC GGCGGAACTC ATCCGAGCCT TGCAGCAGGC CGACGCCAGC
GGCTGGTGCG ATGTCCTGCT TTTGGCGCGC GGCGGCGGCT CAATGGAAGA CCTCTGGGCC
TTCAATGACG AAAGCCTGGG ACGGGCCATC GTGGCCTGCC AGACACCCGT GGTGACCGGG
ATCGGCCATG AGGTGGATTT CACCATCGCC GACTTCGCCG CCGACCTGCG CGCGCCTACG
CCTTCCGCGG CGGCCGAAGC GGTCACACCC GACCGGATCG ACCTCGGCGT TCGCCTGCAA
CGCCTCGAAT CCCAACTCCG CCGGAGTTTC CTCGGGCGGC TGGAAACGGT CCAGCAGCGG
CTCGACTTCG TCGAGCGCCG GCTGCGGCAA TGCCATCCCA AACAGCGGCT GGGGCGCCAG
GCACAACGCC TGGCGGAGCT GAAACACCGG CTCGCTCGCA ACGCCGCCGC GCGCTTGAAT
CTCGAGCGCC AGAGGTTACA AGGTCTGGAG CTGAGGCTCG TCCGCCACGA TCCCGCCCAG
CGGGTGATAC ACCTTACCGG GAAGCTCGAT TCGCTCGAAT CCCGCCTGCG GCGTTCGGCA
TCGCTCCTCC TGGAACGCCG ACGCGAACGG CTCCAGGCCC TGGGCCAGCG GCTGGACACG
GTGAGCCCGC TCGCGACCCT GGCCCGGGGC TACTCGATCG CCCTGCGGGC GGCCGACGAC
GCCGTCGTCC ATTCCTGGGA AGATATTCAG CCCGGAGAGC TTCTTTACAC CCGGCTGGCG
GAGGGTTCAC TCATCAGCCG CGTGGAAAAG GCCGAACCTG GTGATCCGCC GGTTTTTCCG
GGACAATCGC CGCGAGGCCG CTGA
 
Protein sequence
MNLRSSPDGR PEFVYTVSRL NREARITLSS HFGTLWVEGE VSNLAAPASG HLYFTLKDAE 
AQVRCAMFRS SGRLLGFKPT NGDHVLARAQ VGLYEPRGDY QLIVDLLEEA GDGVLHRAFE
ALKKRLDAEG LFDPARKKPI PRFPTCIGVV TSPTGAAIRD ILTVLARRYP AASVIIFPAK
VQGSEAPAEL IRALQQADAS GWCDVLLLAR GGGSMEDLWA FNDESLGRAI VACQTPVVTG
IGHEVDFTIA DFAADLRAPT PSAAAEAVTP DRIDLGVRLQ RLESQLRRSF LGRLETVQQR
LDFVERRLRQ CHPKQRLGRQ AQRLAELKHR LARNAAARLN LERQRLQGLE LRLVRHDPAQ
RVIHLTGKLD SLESRLRRSA SLLLERRRER LQALGQRLDT VSPLATLARG YSIALRAADD
AVVHSWEDIQ PGELLYTRLA EGSLISRVEK AEPGDPPVFP GQSPRGR