Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | MCA1783 |
Symbol | lolA |
ID | 3102851 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Methylococcus capsulatus str. Bath |
Kingdom | Bacteria |
Replicon accession | NC_002977 |
Strand | - |
Start bp | 1913421 |
End bp | 1914047 |
Gene Length | 627 bp |
Protein Length | 208 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 637170943 |
Product | outer membrane lipoprotein carrier protein LolA |
Protein accession | YP_114221 |
Protein GI | 53804159 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG2834] Outer membrane lipoprotein-sorting protein |
TIGRFAM ID | [TIGR00547] periplasmic chaperone LolA |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 0.839422 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCCCGCAT TCCGATACCT GATTGTCCTG CCGCTGCTGT GCTGGGGGTT CGCCTCGCAG GCGGAGACCA CACCGCAGAG CCGCCTGAAG AGCTTCCTCG ATTCGGCTCG CACTTTGCAG GCCGACTTCA CCCAGGTCCG GCTCGACGAA AGCGGTCGGC CCCGGCAGGA GAGCGGGGGT TCCTTCTATT TGCAGCGGCC CGGCAAGTTC CGTTGGGATT ACACCAAGCC CTACCGGCAG CAAATCGTCT CCAGCGGTGG CAAGGTCTGG TTCTACGACG TCGACCTGGA ACAGGTGACA GCCAAGAGGC TCGGCCAGGC CGTGGGTTCG ACGCCGGCCC TGCTGCTGAG CGGCGAAATG GCGCTGGAGG ACAATTTCAC CATCGAGGAC CAGGGGACCG AGGAGGGCAT GTACTGGATC AAGCTGGTGC CCAAGTCGGA AGAAGGCGGA TTCCGCTACG TGCTGATCGG GCTCGAAGGC GACAAGCTGG CCGGTATGGA GCTGAGTGAC AATTTCGGCC AGTTGACGCG CATCTATTTC GCCAATCTCC GGACCGGCAT CACCTTGGAC CCCAAGCTGT TCCAGTTCAG CCCGCCAGCC GGAGTGGATG TGTTCGAGGA CAAGTAG
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Protein sequence | MPAFRYLIVL PLLCWGFASQ AETTPQSRLK SFLDSARTLQ ADFTQVRLDE SGRPRQESGG SFYLQRPGKF RWDYTKPYRQ QIVSSGGKVW FYDVDLEQVT AKRLGQAVGS TPALLLSGEM ALEDNFTIED QGTEEGMYWI KLVPKSEEGG FRYVLIGLEG DKLAGMELSD NFGQLTRIYF ANLRTGITLD PKLFQFSPPA GVDVFEDK
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