| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | MCA1756 |
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| Symbol | gabD |
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| ID | 3103308 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Methylococcus capsulatus str. Bath |
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| Kingdom | Bacteria |
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| Replicon accession | NC_002977 |
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| Strand | + |
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| Start bp | 1876907 |
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| End bp | 1878382 |
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| Gene Length | 1476 bp |
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| Protein Length | 491 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 637170917 |
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| Product | succinate-semialdehyde dehydrogenase (NADP+) |
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| Protein accession | YP_114195 |
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| Protein GI | 53804215 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG1012] NAD-dependent aldehyde dehydrogenases |
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| TIGRFAM ID | [TIGR01780] succinate-semialdehyde dehydrogenase |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGCCATG AACTCCGACT CGACCAGCCC GGCCTGCTGC GTACCCGGTG CCTGATCGAC
GGCCAATGGG TCGACGCCGA CCACTCAAAG ACTTTTTCCG TGACCGATCC GGCCACCGGC
CGGGCTCTGG CCGATGTCCC TGCCATGGGC GCCGCCGAGA CCATGCGGGC GATCGCCGCC
GCGGAACACG CCTGGACCGG CTGGCGCGGC AAGACCGCCA AGGAGCGCGC CGCGGTCTTG
CGCCGCTGGT ACGAGCTGAT CCTGAGCCAT ACCGAAGACC TCGCTCGCAT CCTCACCGCC
GAGCAGGGCA AGCCACTGAC CGAGGCCCGC AACGAGATCG GCTACGCCGC CGGCTTCGTC
GAATGGTTCG CGGAGGAGGC TGGACGCGCC TACGGCGAAA CCATCCCCTC CCCCGTCCCG
GACAAGCGGC TGCTGGTCAT CCGCCAGCCC ATCGGTGTAT GCGCAGCCAT CACGCCCTGG
AATTTCCCGG CGGCGATGAT CACCCGCAAG ATCGCGCCGG CCCTGGCCGC CGGTTGCACC
GTAGTGGTGA AACCCGCCGA GCAGACGCCG CTGACCGCCC TCGCCCTGGC CGACCTAGCG
GTGCAGGCGG GCTTTCCGCC CGGCGTGATC AACGTCGTGA CCGGCGATCC GGAAGCGATC
GGCGGCGAAC TGACTTCCAA TCCCTTGATC CGCAAACTCT CCTTCACTGG CTCGACCGAG
GTCGGACGCC TCTTGATGGC GCAATGCGCC GCGACGGTGA AGAAAATCTC GCTGGAGCTG
GGCGGCAACG CGCCCTTCAT CGTGTTCGAG GACGCCGATC TGGATGCCGC GGTCGAGGGC
GCCTTGCTGT CGAAGTACCG CAACACCGGC CAGACCTGCG TCTGCACCAA CCGCTTCCTG
ATCCAGGATT CGATCTACGA CGCCTTCGCC GAACGCCTCG CGGCCAAGGT GCGCAGGCTC
GAGGTCGGCA ACGGCCTGGA CGAGGGCGTC GTCCAAGGAC CGCTCATCGA CGAGCAGGCG
CTGGCCAAGG TGGAGCGACA TATCGCCGAC GCCCTGGACA GAGGCGCCCG GGTGCTGGCG
GGCGGCGGAC GGCACCCCCT GGGCGGACGG TTTTTCCAGC CCACGGTGCT CGTCGATGTC
ACGCCAGAGA TGCTGTGCAC GCGCGAGGAA ACTTTCGGGC CGGTGGCGCC ATTGCTGCGC
TTCGGTTCCG AGGAAGAGGC CCTCGCAATC GCCAACGCCA CCGAGTATGG ACTCGCCGCC
TATTTCTACA CCCGCGACCT GGCCCGCGCC TTCCGCGTCG GCGAAGCACT GGAATACGGC
ATGGTCGGCA TCAACACCGG CATGCTCTCC TATGACGTCG CACCCTTCGG CGGCGTCAAG
CAGTCCGGCA TCGGCCGGGA AGGTTCGCAC CATGGCATGG ACGAATACCT GGAACTCAAA
TACCTCTGTC TAGGCGGGAT GGCGCCATCC GCCTGA
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| Protein sequence | MSHELRLDQP GLLRTRCLID GQWVDADHSK TFSVTDPATG RALADVPAMG AAETMRAIAA
AEHAWTGWRG KTAKERAAVL RRWYELILSH TEDLARILTA EQGKPLTEAR NEIGYAAGFV
EWFAEEAGRA YGETIPSPVP DKRLLVIRQP IGVCAAITPW NFPAAMITRK IAPALAAGCT
VVVKPAEQTP LTALALADLA VQAGFPPGVI NVVTGDPEAI GGELTSNPLI RKLSFTGSTE
VGRLLMAQCA ATVKKISLEL GGNAPFIVFE DADLDAAVEG ALLSKYRNTG QTCVCTNRFL
IQDSIYDAFA ERLAAKVRRL EVGNGLDEGV VQGPLIDEQA LAKVERHIAD ALDRGARVLA
GGGRHPLGGR FFQPTVLVDV TPEMLCTREE TFGPVAPLLR FGSEEEALAI ANATEYGLAA
YFYTRDLARA FRVGEALEYG MVGINTGMLS YDVAPFGGVK QSGIGREGSH HGMDEYLELK
YLCLGGMAPS A
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