| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | MCA1734 |
|---|
| Symbol | alr |
|---|
| ID | 3102895 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methylococcus capsulatus str. Bath |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_002977 |
|---|
| Strand | - |
|---|
| Start bp | 1850205 |
|---|
| End bp | 1851284 |
|---|
| Gene Length | 1080 bp |
|---|
| Protein Length | 359 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 66% |
|---|
| IMG OID | 637170895 |
|---|
| Product | alanine racemase |
|---|
| Protein accession | YP_114173 |
|---|
| Protein GI | 53803938 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG0787] Alanine racemase |
|---|
| TIGRFAM ID | [TIGR00492] alanine racemase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 9 |
|---|
| Plasmid unclonability p-value | 0.229212 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGGTGCCCG CAGCCCGTGC CGTCCTGGAC ATGGCGGCCT TCGCCCACAA TTTCGCCTGG
ATTCGCGCCG CCGCGCCGGA TTCGAAAATC ATGGCCGTGA TCAAGGCCAA CGCCTACGGG
CACGGACTGA TCCGGGCCGC GCGAGCGCTG CCGGCAGCGG ATGCGTTTGC CGTGGCGCGG
GTGGAAGAGG GCATCGTTCT GCGTCAGGCC GGTATCGCTC AACGCATCGC CGTGTTGCAG
GGTTATGGCG ACGAAGAAGG GATGAGGCTG AGCGCCCGCC ATGGTCTCGA ACCGGTGATC
CATTCCGGCT TCCAGCTTGA TCTGCTGGAG CGGCTCGATA CTTCCGTCCC AATGGGGGTG
TGGCTCAAGG CGGACAGCGG GATGCATCGG CTGGGTCTGG CCGACGAGGA GTTCGCCCGG
GCGCGGTTGC GGCTGGCGCG GATGCCTCAG GTGCGCCAGC CGGTGCCTGT CATGACCCAT
CTGGCCAATG CCGACGCCAC CGATGATCCG ACCACCGAAA TCCAGCTGCG TTGTTTTGGG
CGGATGGCAG GCGGGCGGGG CGAATTCAGC ATCGGCAACT CGGCGGGGTT GATGGCCTGG
GCGGCGGCCC GCAGTGCCTG GGTCAGGCCC GGCATCCTGC TGTATGGCGT ATCGCCGTTT
CCTGGACGGA GCGGACCGGA AGAAGGTTTG ATGCCGGTCA TGACCTTGCA GAGCCGCCTG
ATCGCGGTCA AGCAACTGAA GACCGGCGAT GCGGTTGGAT ACGGCGGCGA CTTCATCTGC
CGCCGCCCGA CCCGCATGGG CATCGCGGCC ATAGGCTACG GCGATGGTTA CCCCCGCCGC
GCGGCCACCG GCACGCCGGT GCTGGTCCGG GGCAGGCGCG TGCCGCTGAT CGGCCGGGTC
TCGATGGACA TGATATCGGT CGATCTGACC GACTGCCCGT CGGCGGAAAT CGGCGATACC
GTGACGCTAT GGGGACAAGG GCTGCCGGTG GAGGAAATCG CGCTTCACGC CGACACCATT
CCCTACGTGT TACTGTGCAA TGTCACCCAG CGGGTGAACA TGGTGGAGAC AGTCGCCTGA
|
|---|
| Protein sequence | MVPAARAVLD MAAFAHNFAW IRAAAPDSKI MAVIKANAYG HGLIRAARAL PAADAFAVAR
VEEGIVLRQA GIAQRIAVLQ GYGDEEGMRL SARHGLEPVI HSGFQLDLLE RLDTSVPMGV
WLKADSGMHR LGLADEEFAR ARLRLARMPQ VRQPVPVMTH LANADATDDP TTEIQLRCFG
RMAGGRGEFS IGNSAGLMAW AAARSAWVRP GILLYGVSPF PGRSGPEEGL MPVMTLQSRL
IAVKQLKTGD AVGYGGDFIC RRPTRMGIAA IGYGDGYPRR AATGTPVLVR GRRVPLIGRV
SMDMISVDLT DCPSAEIGDT VTLWGQGLPV EEIALHADTI PYVLLCNVTQ RVNMVETVA
|
|---|
| |