Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | MCA1660 |
Symbol | glyA |
ID | 3102672 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Methylococcus capsulatus str. Bath |
Kingdom | Bacteria |
Replicon accession | NC_002977 |
Strand | - |
Start bp | 1762420 |
End bp | 1763676 |
Gene Length | 1257 bp |
Protein Length | 418 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 637170822 |
Product | serine hydroxymethyltransferase |
Protein accession | YP_114103 |
Protein GI | 53804250 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0112] Glycine/serine hydroxymethyltransferase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 6 |
Plasmid unclonability p-value | 0.0479076 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTTCAGCA AGGGTATGGA AATTGCCGGA TTCGACGACG AACTCTGGGC TGCGATCCAG GAAGAGGAAC GCAGGCAAGA GGACCATATC GAGCTGATCG CATCGGAGAA CTATGCCAGC CCGCGGGTGC TGCAGGCACA GGGAACCGTG CTGACCAACA AATACGCGGA AGGGTATCCG GGCAAACGCT ACTACGGAGG CTGCGAGTAC GTCGACATTG TGGAGACACT GGCCATCGAG CGCGCGAAAC GACTGTTCGG GGCTGATTAT GCCAATGTCC AGCCGCATTC CGGTTCGCAG GCCAATGCCG CCGTGTACAT GGCTTTGCTG AAGCCGGGCG ATACGGTGCT GGGCATGAGT CTGGCGCACG GTGGACATCT GACCCATGGC GCCAAGGTCA ACTTTTCAGG CAAGATTTAC AATGCCGTAC AATATGGACT CAACCCGGAA ACCGGGGAGA TCGATTACGA CCAGGTCGAC GAACTGGCCC GGGAGCACCG TCCAAAGATG ATCGTGGCCG GTTTCTCGGC CTACTCCCAG GTGGTCGACT GGCAGCGTTT CCGGGCGATT GCCGACTCGG TCGGTGCCTG GCTCATGGTC GACATGGCCC ACGTCGCGGG GCTGATCGCG GCCGGCCTGT ACCCCAGCCC GGTGCAGATC GCCGACGTGA CCACGACCAC AACCCACAAG ACGCTTCGTG GCCCGCGCGG TGGCCTGATT CTGGCCAAAG CCAATCCCGA GGTCGAGAAA CAGCTCAACT CGCTGGTTTT CCCCGGCATT CAAGGGGGGC CGCTGATGCA TGTGATCGCG GCGAAGGCAG TGGCATTAAA GGAGGCCTTG CAGCCGGATT TCAGGCACTA CCAGTCAGCG GTGATGGAGA ACGCCGACGC CATGGCGAAG ACTTTCATCG AGCGCGGCTA CCGTATCGTG TCGGGCGGCA CCCGGAATCA TCTGTTCCTG GTCGATCTGA TCCAAAAGGG CCTCACCGGC AAGCTGGCGG AAGAGGTGTT GGGCAGAGCG CATATCACCG TCAACAAAAA TGCGGTGCCG AACGATCCGC AGTCGCCCTT CGTGACCAGC GGCATCCGGG TGGGGACCCC CGCGGTGACG ACGCGCGGCT TTGGGGTCGA GGAGTGCCGG CTGTTGGCAG GCTGGATGTG CGATATCATG GACTGCCCGG GAGATGAAAC GGTCATAGGC CAGGTGCGCG AGGAGGTGAC CCATCTGTGC CGGCGTTTCC CGGTCTATGC CAACTGA
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Protein sequence | MFSKGMEIAG FDDELWAAIQ EEERRQEDHI ELIASENYAS PRVLQAQGTV LTNKYAEGYP GKRYYGGCEY VDIVETLAIE RAKRLFGADY ANVQPHSGSQ ANAAVYMALL KPGDTVLGMS LAHGGHLTHG AKVNFSGKIY NAVQYGLNPE TGEIDYDQVD ELAREHRPKM IVAGFSAYSQ VVDWQRFRAI ADSVGAWLMV DMAHVAGLIA AGLYPSPVQI ADVTTTTTHK TLRGPRGGLI LAKANPEVEK QLNSLVFPGI QGGPLMHVIA AKAVALKEAL QPDFRHYQSA VMENADAMAK TFIERGYRIV SGGTRNHLFL VDLIQKGLTG KLAEEVLGRA HITVNKNAVP NDPQSPFVTS GIRVGTPAVT TRGFGVEECR LLAGWMCDIM DCPGDETVIG QVREEVTHLC RRFPVYAN
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