| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | MCA1602 |
|---|
| Symbol | hypB |
|---|
| ID | 3102408 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methylococcus capsulatus str. Bath |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_002977 |
|---|
| Strand | + |
|---|
| Start bp | 1708878 |
|---|
| End bp | 1709729 |
|---|
| Gene Length | 852 bp |
|---|
| Protein Length | 283 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 66% |
|---|
| IMG OID | 637170770 |
|---|
| Product | hydrogenase accessory protein HypB |
|---|
| Protein accession | YP_114052 |
|---|
| Protein GI | 53804354 |
|---|
| COG category | [K] Transcription
[O] Posttranslational modification, protein turnover, chaperones |
|---|
| COG ID | [COG0378] Ni2+-binding GTPase involved in regulation of expression and maturation of urease and hydrogenase |
|---|
| TIGRFAM ID | [TIGR00073] hydrogenase accessory protein HypB |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 15 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGTGCGACA CCTGCGGCTG CAACATCACC GACGGCAACC GCCATCTGCT GCGCGCCGAC
GGCTCGCACG CCAAAGTCAC CGCCGTCTCC GTCCTGAACA AACTGCTCCG GCACAACGAC
GCCCAGGCCG AGGCGAACCG GGCCCTGTTC GACCGGCACG GCGTACTGGT CATCAACCTG
ATGTCCTCGC CCGGCTCGGG CAAGACTTCC CTGCTGGAAG CGACCATCAA GGCGCTGAAC
GGCGGCCTGC GCATCGCCGT CATCGAAGGC GACCTGGAAA CCGAGAACGA CGCGGCGCGC
ATCCGCGCAC TGGGCGTCGA GGCGCACCAG ATCACCACCG GCACGGCCTG CCATCTCGAC
GCGCATCTGG TCGCCAATGT ATTGCCCAGG CTCGATTTGG AGAACATCGA TGTCCTGTTC
ATCGAGAACG TCGGCAACCT GGTCTGCCCC GCCAGTTTCG ACCTGGGCCA TCATCTCAAT
CTGACCCTGC TGTCCGTCAC CGAGGGCGAC GACAAGCCGG CCAAGTACCC GGTCATGTTC
CGGGCGGCCG ACGCCATGGT CATCAGCAAG ACCGATCTGC TGGCGGTGCT CGACGAGTTT
TCGCCCGACA AGGCGGAAGC CTGCCTGCGG CGGCTGGCCT CGAATGCCCC GGTGCTGCGC
GTCTCCAGCA AGACCGGCGA GGGGATGCGG GAATGGCTGG ACTGGCTGAA CCAGCGGCTG
GAGCACTACC GGAACCTGCG GCGCGAGAAC CGCAGCCTGA GCCCCGCGGT GCAGTCCGAA
GGCCGGAGGC TGCATGGCCT CGCCAGGCCG GACGTCCGTT TCAAGCCCGC ACCGAAGCCC
CAAACGGCCT GA
|
|---|
| Protein sequence | MCDTCGCNIT DGNRHLLRAD GSHAKVTAVS VLNKLLRHND AQAEANRALF DRHGVLVINL
MSSPGSGKTS LLEATIKALN GGLRIAVIEG DLETENDAAR IRALGVEAHQ ITTGTACHLD
AHLVANVLPR LDLENIDVLF IENVGNLVCP ASFDLGHHLN LTLLSVTEGD DKPAKYPVMF
RAADAMVISK TDLLAVLDEF SPDKAEACLR RLASNAPVLR VSSKTGEGMR EWLDWLNQRL
EHYRNLRREN RSLSPAVQSE GRRLHGLARP DVRFKPAPKP QTA
|
|---|
| |