| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | MCA1587 |
|---|
| Symbol | |
|---|
| ID | 3104908 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methylococcus capsulatus str. Bath |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_002977 |
|---|
| Strand | + |
|---|
| Start bp | 1693459 |
|---|
| End bp | 1695894 |
|---|
| Gene Length | 2436 bp |
|---|
| Protein Length | 811 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 64% |
|---|
| IMG OID | 637170755 |
|---|
| Product | putative phosphoketolase |
|---|
| Protein accession | YP_114037 |
|---|
| Protein GI | 53804073 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG3957] Phosphoketolase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 12 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGCAACCC AATTCCCCCT GTCCTCCGAA TTCGAACGGC TCACCGTCTA CGGGCCGACC
CGCGCCACTG TCAGCGGAAC ACCGCTGGAT GCCGAAGAAG TCCGCAAAAT CCATGCGTTC
TGGCGAGCCT GCAATTACCT GGCGCTGGGC ATGATCTACC TGCGGGGGAA TCCGCTGCTG
CGTGAACCGC TCAAACCCGA GCACATCAAG CACCGTCTGC TCGGCCATTG GGGCTCCAGC
CCCAACCTTG CGTTCGTCTA CACCCATCTG AACCGGGCCA TCCGGAAACA CGACCTCGAC
ATGATCTTCA TGGCCGGCCC CGGCCACGGC GCCCCCGGCG TGCTGGGCCC GCTCTACCTG
GAAGGCAGCT ACTCCGAAAT CTACCCCGAC AAGGACCTGA GCGAAGAAGG CCTGCTGAAC
TTCTTCAAGC AGTTCTCCTT CCCCGGCGGA ATCGGCAGCC ATTGCACCCC CGAGACACCG
GGCTCGATCC ACGAGGGCGG CGAGCTGGGC TACGTGCTGT CGCACGCCTG CGGCGCAGCC
TTCGACAACC CGGACCTGAT CGTGGCCGCC GTGGTCGGCG ACGGCGAGGC GGAAACCGGC
CCCCTGGCCA CTTCCTGGCA CATCAACAAA TTTCTCAACC CGATCCGCGA CGGCGCGGTG
CTGCCGATCC TCAACCTCAA CGGCTACAAG ATCAACAACC CCACCCTGCT GGCGCGCATC
AGCCACGAAG AATTGGAAAA TCTGCTCAGG GGTTACGGCT ACACGCCTTA TTTCGTGGAG
GGCTCGGAAC CGGAAAGCAT GCACCAGGCG ATGGCCGCGA CGGTGGACCG CAGCATCGAA
GACATCCGCG CCGCCCAGAC CGAGGCCCGC GCCAGCGGCA TCGCCCGACG GCCGCGCTGG
CCGATGATCG TGCTGCGCTC GCCCAAGGGC TGGACCGCGC CACGCCAGAT CGACGGCCAC
AACGTCGAGG GCTTCTGGCG CGCTCATCAG GTGCCGGTAG CCGACGTCGC GAAAAATCCC
GAACACCTGA AGCTGCTGGA AGGCTGGATG CGCAGCTACA AGCCGGAAGA ACTGTTCGAC
GCCGAAGGCT GCCCCGTCGC CGAAATCCGG GAAATGGCGC CGGCCGGTCT CCGCCGCATG
GGTCTCAACC CCCACGCCAA CGGCGGCCAT CTGAAAAAGG CCCTGCGCAT CCCTAATTTC
CGCAACTACG GCATCGAAGT CGCCAAACCG GGCCAGATCG AAGCGCCGAA CACCCAGCCG
CTGGGCGTGT TCCTGCGCGA CGTGATGAAG GAGAACGCGC ACAACTTCCG GCTGTTCGGC
CCTGACGAGA ATACCTCCAA CAAGCTGGAC GCCGTCTACG CCGCTGCCAA GAAATTCTGG
ATCGCCGAGT ATTTCCCCGA AGACCAGGAT GGCGGCGAAC TGGCCCCCGA CGGCCGGGTC
ATGGAAATGC TCAGCGAGCA TACCCTGGAA GGCATGCTGG AAGGCTACCT TCTGACCGGG
CGCCACGGCT TCCTCTCGAC CTACGAAGCC TTCGTCCACG TCATCGATTC GATGTTCAAC
CAGCACGCCA AGTGGCTGTC CATCTGCAAC CAGCTGTCCT GGCGCCAGGA CGTGGCCTCG
CTCAACCTGC TCATCACTTC GACGGTCTGG CGACAGGACC ACAACGGCTT CACCCACCAG
GACCCCGGTT TCCTGGACGT CGTCGTGAAC AAGAGCGCCG ACGTCACCCG CATCTACCTG
CCGCCCGACG TCAACAGCCT GCTGTCGGTC GCCGACCACT GCCTGCGCAG CCAGAACTAC
ATCAACGTGA TCGTGTCGGA CAAACAGTTG CATCTGCAGT TCATGGACAT GGACGCCGCG
ATCGCCCATT GCACGGAGGG CTTGGGCATC TGGGAATGGG CCAGCAACGA CGAGGGCCAG
GAGCCCGACG TGGTCATGGC CTGCGCCGGC GACATCCCGA CCCTGGAAGC CCTGGCCGCC
ACCGCCCTGC TGCGCGAGGA GTTCCCGGAA CTGAAGATCC GCTTCATCAA CGTGGTGGAT
CTGTTCAAGC TGCAGCCCGA GTCCGAGCAT CCGCACGGTC TCAGCGACAA GGATTTCGAC
AGCCTGTTCA CCAGGGACAA GCCGGTCATC TTCAACTTCC ACGGCTATCC CTGGCTGATC
CACCGCCTCG CCTACCGGCG CACCAACCAC GCCAACATGC ACGTGCGCGG CTACAAGGAG
AAAGGCAACA TCAACACCCC GCTGGAACTG GCGATCAACA ACCAGATCGA CCGCTTCAGC
CTGGCCATCG ACGTCATCGA CCGGATTCCG GAGATCGCGG TCTCCGGCGC CCACGCCAAG
GCCCGGTTCC GCAAACAGCA GATCGCCTGC CGCCAGTATG CCTACGAGCA CGGCGTCGAC
ATGCCGGAGG TCGCGGGCTG GCGCTGGCCG GGCTGA
|
|---|
| Protein sequence | MATQFPLSSE FERLTVYGPT RATVSGTPLD AEEVRKIHAF WRACNYLALG MIYLRGNPLL
REPLKPEHIK HRLLGHWGSS PNLAFVYTHL NRAIRKHDLD MIFMAGPGHG APGVLGPLYL
EGSYSEIYPD KDLSEEGLLN FFKQFSFPGG IGSHCTPETP GSIHEGGELG YVLSHACGAA
FDNPDLIVAA VVGDGEAETG PLATSWHINK FLNPIRDGAV LPILNLNGYK INNPTLLARI
SHEELENLLR GYGYTPYFVE GSEPESMHQA MAATVDRSIE DIRAAQTEAR ASGIARRPRW
PMIVLRSPKG WTAPRQIDGH NVEGFWRAHQ VPVADVAKNP EHLKLLEGWM RSYKPEELFD
AEGCPVAEIR EMAPAGLRRM GLNPHANGGH LKKALRIPNF RNYGIEVAKP GQIEAPNTQP
LGVFLRDVMK ENAHNFRLFG PDENTSNKLD AVYAAAKKFW IAEYFPEDQD GGELAPDGRV
MEMLSEHTLE GMLEGYLLTG RHGFLSTYEA FVHVIDSMFN QHAKWLSICN QLSWRQDVAS
LNLLITSTVW RQDHNGFTHQ DPGFLDVVVN KSADVTRIYL PPDVNSLLSV ADHCLRSQNY
INVIVSDKQL HLQFMDMDAA IAHCTEGLGI WEWASNDEGQ EPDVVMACAG DIPTLEALAA
TALLREEFPE LKIRFINVVD LFKLQPESEH PHGLSDKDFD SLFTRDKPVI FNFHGYPWLI
HRLAYRRTNH ANMHVRGYKE KGNINTPLEL AINNQIDRFS LAIDVIDRIP EIAVSGAHAK
ARFRKQQIAC RQYAYEHGVD MPEVAGWRWP G
|
|---|
| |