Gene MCA1583 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMCA1583 
Symbol 
ID3104740 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethylococcus capsulatus str. Bath 
KingdomBacteria 
Replicon accessionNC_002977 
Strand
Start bp1685536 
End bp1686954 
Gene Length1419 bp 
Protein Length472 aa 
Translation table11 
GC content67% 
IMG OID637170751 
ProductGGDEF domain-containing protein 
Protein accessionYP_114033 
Protein GI53804085 
COG category[T] Signal transduction mechanisms 
COG ID[COG2199] FOG: GGDEF domain
[COG3447] Predicted integral membrane sensor domain 
TIGRFAM ID[TIGR00254] diguanylate cyclase (GGDEF) domain 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCGCATCG AATTACAGAA TCTAACCGTC GCCCTGGCCT TTGCCGCGGC CGGGTTCGGC 
ACCTCGGCGC TGCTTGCGGG CTACAGCTTT TTCCCCTCGC CTTTCTGGCC GCCGGCCGGC
ATTGCGCTGG CGGCAGCGTT GCTGAGCGGT AACCGGGCAT GGCCCGGGAT CTTCGCCGGG
GCCTTCTTCG TCAATTGGCG ACTGTTCGGC CTGCCGCTCC CGCTGGCGAC GGCCATATCC
CTGGTCAACG TCGCCACCCC GGTCCTCGGC GCCCTCCTCG TCCGTTGGAC GACTCGCTCC
AAACAACCGT TCTTCCGACT GCGCCACGTG GTCTGCTTCA TCGTCTTTGG CGCGCTGGTG
CCGGCGTGCC TGGCCGCTTC CACCGGGGTT GCGCTGGCGG TCGCCTCCGG CCTCGTTCCG
CCGCAGGGCA TCGACAGCGC TTGGTGGCGC TGGACGCTTT CAGAGGCGGG GGGCATTTTT
CTCCTGGGAC CCACGCTGAT CCTGTGGTGC AGTGTCCGCC GGCGCCAGCG GCAGCCGGGA
AACTTCTGGG AGGCATTCAC CGTGGCAGCC GCGACGCTGT CCTTCGCCGT GGCGGTGTTT
TTGGGCATCC GTGCCTCCGT GCATCCGTTC GAAGGACTTC CTTACCTGCT GTTTGCACCG
GTGCTGTGGC TGACGGTGCG CTGTTCCCTG CAGGCAGCCA CCGCGCTGTT GTCCGCCGTG
GCACTCATCG CGATCGGGGG GACGCTGCTG GGGCTCGGAC CGTTCCATCT CTTGGGCAGC
ACTCAACCCC TCCTGAACGT GGGCTTGCTG CTGGTCGTCC TGGGAACCTC CACGCTGGCC
ATGGGGGCGC TGGTCAGCGA ACGCCGCGCC GCCGAGGAAA AATTGCGGCG AATGAACGAA
ACCCTGGAAC GACGCGTGGC CAGGCGCACG GAGGAGCTGC ACTATCGCGC CACCCGCGAC
GGTCTCACCG GGATGGCCAA CCGCGCTTAT TTCTTCGAGC GGGGGGAAGC GATGCTCGCC
GAAGCGCACG ATACCGGCCG CCCCCTGGGG GCACTGCTCA TCGACGTCGA TGGCCTGAAA
GTCATCAACG ACAGCTATGG CCATCACATG GGCGATTCCG CCATCTCCCG TGTCGCGGGA
GCCTGCCGAG CCGTGTTGCG GAAGGACGAC CTGGGGGGCC GGATCGGTGG TGACGAATTC
GCCGCGCTCC TGCCGGATAC GGATGAAGCC GGGGCCCGGG GGGTGAGCGC CAGGATCGCC
GAAGCGTTGC GATCGGCTTC GACCGAGGGA CTGGAAGTCG GGGCCAGCAT AGGCGTGGCA
GTGAGCGAAT CATCGGACGG CGGGCTGGAT GCCCTGCTGC GCCGGGCCGA TGCCGCCATG
TATGCGGAGA AACAAAGCCG TTCCGGCGGG GGGAGGTAG
 
Protein sequence
MRIELQNLTV ALAFAAAGFG TSALLAGYSF FPSPFWPPAG IALAAALLSG NRAWPGIFAG 
AFFVNWRLFG LPLPLATAIS LVNVATPVLG ALLVRWTTRS KQPFFRLRHV VCFIVFGALV
PACLAASTGV ALAVASGLVP PQGIDSAWWR WTLSEAGGIF LLGPTLILWC SVRRRQRQPG
NFWEAFTVAA ATLSFAVAVF LGIRASVHPF EGLPYLLFAP VLWLTVRCSL QAATALLSAV
ALIAIGGTLL GLGPFHLLGS TQPLLNVGLL LVVLGTSTLA MGALVSERRA AEEKLRRMNE
TLERRVARRT EELHYRATRD GLTGMANRAY FFERGEAMLA EAHDTGRPLG ALLIDVDGLK
VINDSYGHHM GDSAISRVAG ACRAVLRKDD LGGRIGGDEF AALLPDTDEA GARGVSARIA
EALRSASTEG LEVGASIGVA VSESSDGGLD ALLRRADAAM YAEKQSRSGG GR