Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | MCA1583 |
Symbol | |
ID | 3104740 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Methylococcus capsulatus str. Bath |
Kingdom | Bacteria |
Replicon accession | NC_002977 |
Strand | + |
Start bp | 1685536 |
End bp | 1686954 |
Gene Length | 1419 bp |
Protein Length | 472 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 637170751 |
Product | GGDEF domain-containing protein |
Protein accession | YP_114033 |
Protein GI | 53804085 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG2199] FOG: GGDEF domain [COG3447] Predicted integral membrane sensor domain |
TIGRFAM ID | [TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCGCATCG AATTACAGAA TCTAACCGTC GCCCTGGCCT TTGCCGCGGC CGGGTTCGGC ACCTCGGCGC TGCTTGCGGG CTACAGCTTT TTCCCCTCGC CTTTCTGGCC GCCGGCCGGC ATTGCGCTGG CGGCAGCGTT GCTGAGCGGT AACCGGGCAT GGCCCGGGAT CTTCGCCGGG GCCTTCTTCG TCAATTGGCG ACTGTTCGGC CTGCCGCTCC CGCTGGCGAC GGCCATATCC CTGGTCAACG TCGCCACCCC GGTCCTCGGC GCCCTCCTCG TCCGTTGGAC GACTCGCTCC AAACAACCGT TCTTCCGACT GCGCCACGTG GTCTGCTTCA TCGTCTTTGG CGCGCTGGTG CCGGCGTGCC TGGCCGCTTC CACCGGGGTT GCGCTGGCGG TCGCCTCCGG CCTCGTTCCG CCGCAGGGCA TCGACAGCGC TTGGTGGCGC TGGACGCTTT CAGAGGCGGG GGGCATTTTT CTCCTGGGAC CCACGCTGAT CCTGTGGTGC AGTGTCCGCC GGCGCCAGCG GCAGCCGGGA AACTTCTGGG AGGCATTCAC CGTGGCAGCC GCGACGCTGT CCTTCGCCGT GGCGGTGTTT TTGGGCATCC GTGCCTCCGT GCATCCGTTC GAAGGACTTC CTTACCTGCT GTTTGCACCG GTGCTGTGGC TGACGGTGCG CTGTTCCCTG CAGGCAGCCA CCGCGCTGTT GTCCGCCGTG GCACTCATCG CGATCGGGGG GACGCTGCTG GGGCTCGGAC CGTTCCATCT CTTGGGCAGC ACTCAACCCC TCCTGAACGT GGGCTTGCTG CTGGTCGTCC TGGGAACCTC CACGCTGGCC ATGGGGGCGC TGGTCAGCGA ACGCCGCGCC GCCGAGGAAA AATTGCGGCG AATGAACGAA ACCCTGGAAC GACGCGTGGC CAGGCGCACG GAGGAGCTGC ACTATCGCGC CACCCGCGAC GGTCTCACCG GGATGGCCAA CCGCGCTTAT TTCTTCGAGC GGGGGGAAGC GATGCTCGCC GAAGCGCACG ATACCGGCCG CCCCCTGGGG GCACTGCTCA TCGACGTCGA TGGCCTGAAA GTCATCAACG ACAGCTATGG CCATCACATG GGCGATTCCG CCATCTCCCG TGTCGCGGGA GCCTGCCGAG CCGTGTTGCG GAAGGACGAC CTGGGGGGCC GGATCGGTGG TGACGAATTC GCCGCGCTCC TGCCGGATAC GGATGAAGCC GGGGCCCGGG GGGTGAGCGC CAGGATCGCC GAAGCGTTGC GATCGGCTTC GACCGAGGGA CTGGAAGTCG GGGCCAGCAT AGGCGTGGCA GTGAGCGAAT CATCGGACGG CGGGCTGGAT GCCCTGCTGC GCCGGGCCGA TGCCGCCATG TATGCGGAGA AACAAAGCCG TTCCGGCGGG GGGAGGTAG
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Protein sequence | MRIELQNLTV ALAFAAAGFG TSALLAGYSF FPSPFWPPAG IALAAALLSG NRAWPGIFAG AFFVNWRLFG LPLPLATAIS LVNVATPVLG ALLVRWTTRS KQPFFRLRHV VCFIVFGALV PACLAASTGV ALAVASGLVP PQGIDSAWWR WTLSEAGGIF LLGPTLILWC SVRRRQRQPG NFWEAFTVAA ATLSFAVAVF LGIRASVHPF EGLPYLLFAP VLWLTVRCSL QAATALLSAV ALIAIGGTLL GLGPFHLLGS TQPLLNVGLL LVVLGTSTLA MGALVSERRA AEEKLRRMNE TLERRVARRT EELHYRATRD GLTGMANRAY FFERGEAMLA EAHDTGRPLG ALLIDVDGLK VINDSYGHHM GDSAISRVAG ACRAVLRKDD LGGRIGGDEF AALLPDTDEA GARGVSARIA EALRSASTEG LEVGASIGVA VSESSDGGLD ALLRRADAAM YAEKQSRSGG GR
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