| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | MCA1545 |
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| Symbol | metH |
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| ID | 3104427 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Methylococcus capsulatus str. Bath |
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| Kingdom | Bacteria |
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| Replicon accession | NC_002977 |
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| Strand | - |
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| Start bp | 1645744 |
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| End bp | 1649457 |
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| Gene Length | 3714 bp |
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| Protein Length | 1237 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 637170718 |
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| Product | B12-dependent methionine synthase |
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| Protein accession | YP_114000 |
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| Protein GI | 53804149 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0646] Methionine synthase I (cobalamin-dependent), methyltransferase domain
[COG1410] Methionine synthase I, cobalamin-binding domain |
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| TIGRFAM ID | [TIGR00640] methylmalonyl-CoA mutase C-terminal domain
[TIGR02082] 5-methyltetrahydrofolate--homocysteine methyltransferase |
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Plasmid Coverage information |
| Num covering plasmid clones | 4 |
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| Plasmid unclonability p-value | 0.396086 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAATCTCC CCGTTACTGC CATGGAGCGT TCGTCGCTCC TAAAACGTCT GCTCAAGGAA
CGCATCCTGT TTCTCGATGG CGCCATGGGT ACGATGATTC AACGCTACAA GCTGGCGGAG
GCCGACTACC GGGGCCAGCG CTTCGCCGAT TGGCCGCGGG ACCTGAAGGG CAACAACGAC
CTCTTGTCGC TGACCCGTCC GGACGTGATC GAGGCCATCC ACTGGGCTTA TCTGGAAGCG
GGGGCCGACA TCGTGGAAAC CAACAGCTTC AATGCCACCC GCATCAGCAT GGCGGATTAC
GGCATGGAGC CGCTGGTCTA CGAGATCAAC GTGGCTTCGG CCCGGCTGGC CCGGCAGGTG
GCGGACCGTA TGAGCCGGCA GACGCCGGAC CGGCCGCGTT TCGTCGCCGG GGTCCTGGGA
CCGACCAGCC GGACCGCCTC GATATCGCCC TCGGTCAATG ATCCAGGTTT CCGCAACATC
GGCTTCGACG AACTGGTGGC GTCCTACGAC GAGGCCGTAC GCGGCCTGGT CGATGGTGGT
GCCGACATCA TTCTGATCGA GACGATCTTC GACACTCTCA ATGCCAAAGC GGCCGTATTC
GCCGTCGAGC GGTTCTTCGA GCAAGAGGGC TACACCCTGC CGGTGATGAT CTCCGGCACC
ATTACCGATG CCTCGGGCCG CACGCTGTCG GGGCAGACTA CCGAGGCCTT CTGGAATTCA
CTGCGCCACG CCAGGCCGAT TTCGATCGGC CTCAATTGCG CACTCGGGGC CAAACAGCTC
CGCCAGCACG TCGAGGAACT CTCGCGCATC GCCGACACGT ACGTCTCCGC ACATCCCAAT
GCCGGCCTGC CCAACGAGTT CGGCGAATAC GACGAATCAC CCGAAGCGAT GGCCCGCGAG
ATCGCCGACT GGGCCGAGCA GGGTTTCCTC AACATCATCG GTGGCTGCTG CGGTACCACG
CCGGCACACA TCGAGGCAAT CCACGACGCG GTCCAGCATT TCCCCCCTCG GCGCATCCCG
GAGATACCGC CGGCCTGCCG GCTGGCCGGC CTGGAACCCT GCAACATCAC GGCGGGCTCA
CTGTTCGTCA ACGTCGGTGA ACGTACCAAC GTGACGGGTT CGGCGGCATT TCGGCGCATG
ATCCGGGAGG CGAAGTATGA TGAAGCCCTG GAAGTGGCGC GCCAGCAGGT CGAGAGCGGA
GCCCAGATCA TCGACGTCAA CATGGACGAG GGCATGCTCG ATTCGAGGGC AGCGATGGTG
CAGTTTCTCA ACCTCATCGC CGCGGAACCC GACATCGCCC GCGTGCCGGT GATGATCGAT
TCCTCCAAGT GGGAGATCCT GGAGGCTGGC CTCAAGTGCC TCCAGGGCAA GGGTATCGTC
AACTCGATCT CGCTCAAGGA AGGGGAGGCG GCTTTTCTCC ACCATGCCCG GTTGGTGCGG
CGTTACGGCG CGGCTGTCAT CGTCATGGCT TTCGACGAAC AGGGCCAGGC CGACACCCGC
GAGCGTAAGG TCGAGATCTG CGAGCGGGCT TACCGGCTGC TGACTGAAAA GGCCGGCTTC
CCGGCCGAGG ACATCATCTT CGATCCCAAC ATCTTCGCGG TGGCGACCGG CATCGAGGAA
CACGACCGCT ATGGTCTCGA TTTCATCGAG GCCGTGGCCG AAATCAAGTC TCGGCTGCCG
CATGCGCTGG TCTCGGGGGG GGTGTCGAAC GTCTCCTTCT CGTTCCGCGG CAACGATGCG
GTGCGTGAGG CCATCCACGC GGTGTTCCTA TACCACGCCA TTCGCGCGGG GATGGACATG
GGGATCGTCA ACGCCGGTCA GCTCGCGATC TACGAGGAAG TGCCGGAGGA ACTGCGCGAC
GCCGTGGAGG ACGTCATCCT CGCCCGCCGT GAGGATGCCA CCGAGCGCCT GCTCGCCATT
GCCGACCGTT ACCGGGGCGA GGAGGGCGCA GGTAGCGAGC GCAAGGCCGA TATGGCCTGG
CGCTCGCTGC CGGTGGACAA GCGCCTGGAA CATGCGCTGG TCAAAGGCAT CGACGAGTTC
ATCGAGGTCG ATACGGAAGA AGCGCGCCGG CAGTTCGAAC GGCCGCTGCA CGTCATCGAA
GGACCGCTGA TGGCCGGTAT GAACGTGGTC GGCGATTTGT TCGGCGCCGG CAAGATGTTC
CTGCCCCAGG TGGTCAAATC GGCGCGGGTG ATGAAGAAGG CCGTGGCCTA TCTGATGCCT
TACATGGACG CCGAGAAGGC TGGAACCGAG GTCGGCACCA ACGGCAAAAT CCTCATGGCG
ACGGTGAAGG GCGACGTGCA CGACATCGGC AAGAACATCG TCGGCGTGGT GCTCCAGTGC
AACGGTTTCG AAGTGATCGA TCTGGGCGTC ATGGTACCCT GCGACAAGAT TTTGCAGACC
GCCCGTGAGG AAAACGTCGA CATCATCGGC TTGTCCGGGC TGATCACGCC CTCATTGGAT
GAGATGGTCC ATGTCGCCAG GGAAATGGAG CGGCTCGGTT TCGAAATTCC GCTCATGATC
GGCGGCGCCA CGACGTCCCG AGCGCACACG GCCGTCAAGA TCGAGCCCAA TTACCATGGG
CCGACCGTCT ATGTGACCGA CGCCTCGCGC AGCGTCGGCG TGGCGGGCAG TCTGCTCAGT
GCCGACCTGA AGGACGAATT CACGGCCCGG CTGCGCAAGG AATACGAAGA GGTACGGCGG
CATCATGCCG GACGCCGCAT CCAGGGTACG TTGCTGAGCC TGCAGCAGGC GCGGGCCAGG
GCCTTCCATA CGGACTGGGC GCATTACGTA CCGCCGGCGC CGCATCTGCT GGGTCTGGAA
GTGTTCGACG CCTACCCCCT GGAAGAGATC GCCGGATACA TCGACTGGTC ACCGTTCTTC
CATACCTGGG AGCTGGCCGG CAGCTATCCA AGGATATTGG ACGACGAGGT GGTAGGGGAA
CACGCCCGCA CACTGCTGCA GGATGCCCGT GCCATGCTGG CGCTCTTGAC CGAACAGCGC
TGGCTCACCG CTCGTGGCGT GATCGGATTT TTTCCAGCCA ATTCGGAAGG GGATGACGTC
GTGCTGTGGA CCGACGAAAG CCGGACCGAG CGGCTGGCGG TGTTGCATCA TCTGCGTCAG
CAGCAGGACA AGCCGGGGGG GCAGCCCGCA TACTGTCTGG CGGATTTCGT CGCGCCGGTC
GGCAGCGGGG TGGCCGACTA CCTGGGCGGA TTCGCCGTGA CCGTTGGCCA TGGCATCGAG
GCGCCGTTGG AGCGGTTCGC CCGGGTCCAT GACGACTACA GCGGCATCAT GCTGAAGGCG
CTTGCCGACC GGCTGGCCGA GGCCTTCGCG GAACGGATGC ACCAGCGGGT GCGGCGTGAG
TTCTGGGGTT ATGCGCCGGA GGAATCGCTG GACAACGAGG CGCTGATCGC CGAGGCGTAT
CGCGGCATCC GGCCGGCCCC GGGTTACCCG GCCTGTCCTG ATCACACCGA GAAGGCCACG
CTGTTCCGCC TGTTGGATGC CGAAGCCAAC TCCGGCATTT CACTGACCGA AAGCTTCGCC
ATGTATCCGG CTTCCTCGGT CAGCGGCTGG TATTTTTCGC ATGCTTCGGC AAAGTACTTC
AACGTCGGTA AGATCGGCCG CGACCAGGTC GAAGATTACG CTCGGCGCAA GGGGATGACG
GTACGCGAGG TCGAGCGCTG GCTGGCGTCG AGTCTCGGCT ACGATGCCGA TTGA
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| Protein sequence | MNLPVTAMER SSLLKRLLKE RILFLDGAMG TMIQRYKLAE ADYRGQRFAD WPRDLKGNND
LLSLTRPDVI EAIHWAYLEA GADIVETNSF NATRISMADY GMEPLVYEIN VASARLARQV
ADRMSRQTPD RPRFVAGVLG PTSRTASISP SVNDPGFRNI GFDELVASYD EAVRGLVDGG
ADIILIETIF DTLNAKAAVF AVERFFEQEG YTLPVMISGT ITDASGRTLS GQTTEAFWNS
LRHARPISIG LNCALGAKQL RQHVEELSRI ADTYVSAHPN AGLPNEFGEY DESPEAMARE
IADWAEQGFL NIIGGCCGTT PAHIEAIHDA VQHFPPRRIP EIPPACRLAG LEPCNITAGS
LFVNVGERTN VTGSAAFRRM IREAKYDEAL EVARQQVESG AQIIDVNMDE GMLDSRAAMV
QFLNLIAAEP DIARVPVMID SSKWEILEAG LKCLQGKGIV NSISLKEGEA AFLHHARLVR
RYGAAVIVMA FDEQGQADTR ERKVEICERA YRLLTEKAGF PAEDIIFDPN IFAVATGIEE
HDRYGLDFIE AVAEIKSRLP HALVSGGVSN VSFSFRGNDA VREAIHAVFL YHAIRAGMDM
GIVNAGQLAI YEEVPEELRD AVEDVILARR EDATERLLAI ADRYRGEEGA GSERKADMAW
RSLPVDKRLE HALVKGIDEF IEVDTEEARR QFERPLHVIE GPLMAGMNVV GDLFGAGKMF
LPQVVKSARV MKKAVAYLMP YMDAEKAGTE VGTNGKILMA TVKGDVHDIG KNIVGVVLQC
NGFEVIDLGV MVPCDKILQT AREENVDIIG LSGLITPSLD EMVHVAREME RLGFEIPLMI
GGATTSRAHT AVKIEPNYHG PTVYVTDASR SVGVAGSLLS ADLKDEFTAR LRKEYEEVRR
HHAGRRIQGT LLSLQQARAR AFHTDWAHYV PPAPHLLGLE VFDAYPLEEI AGYIDWSPFF
HTWELAGSYP RILDDEVVGE HARTLLQDAR AMLALLTEQR WLTARGVIGF FPANSEGDDV
VLWTDESRTE RLAVLHHLRQ QQDKPGGQPA YCLADFVAPV GSGVADYLGG FAVTVGHGIE
APLERFARVH DDYSGIMLKA LADRLAEAFA ERMHQRVRRE FWGYAPEESL DNEALIAEAY
RGIRPAPGYP ACPDHTEKAT LFRLLDAEAN SGISLTESFA MYPASSVSGW YFSHASAKYF
NVGKIGRDQV EDYARRKGMT VREVERWLAS SLGYDAD
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