Gene MCA1537 details

Gene Information

• Locus tag: MCA1537
• Symbol: pilT
• ID: 3103065
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Methylococcus capsulatus str. Bath
• Kingdom: Bacteria
• Replicon accession: NC_002977
• Strand: +
• Start bp: 1638097
• End bp: 1639131
• Gene Length: 1035 bp
• Protein Length: 344 aa
• Translation table: 11
• GC content: 61%
• IMG OID: 637170710
• Product: twitching motility protein PilT
• Protein accession: YP_113992
• Protein GI: 53804164
• COG category: [N] Cell motility; [U] Intracellular trafficking, secretion, and vesicular transport
• COG ID: [COG2805] Tfp pilus assembly protein, pilus retraction ATPase PilT
• TIGRFAM ID: [TIGR01420] pilus retraction protein PilT

Plasmid Coverage information

• Num covering plasmid clones: 14
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGGATATCG CCGAACTGCT GGCCTTCTCG GTCAAGAACA AATCCTCCGA TCTGCATCTT 
TCCTCTGGGT TGCCGCCGAT GATCCGCGTC GACGGCGACA TCCGGCGCAT CAACGTGCCT 
CCGCTGGAGC ACAAGGAAGT GCACGCCCTC ATCTATGACA TCATGAATGA CAAACAGCGC 
CGCGACTTCG AGGAATTTCT GGAAACCGAC TTCTCGTTCG AGCTTCCGGG CGTCGCCCGT 
TTCCGCGTCA ACGCCTTCAA CCAGGATCGG GGCGCGGCGG CCGTATTTCG CACCATTCCT 
TCCAAGGTCC TGACACTGGA GGAACTGGGC TGTCCGAAAT TCTTCCAGGA TGTCACCCGC 
CAGCCACGCG GCCTGATCGT GGTCACGGGA CCGACGGGTT CGGGCAAGTC CACCACGCTG 
GCGGCCATGA TCGATTACAT CAACTCCAAC GACTATTCTC ACATTCTGAC CATCGAGGAT 
CCGATCGAGT TCGTCCACCA AAGCAAGAAA TGCCTGATCA ACCAGCGCGA GGTGCACCGT 
AACACCTTGG GCTTCAACGA AGCCCTGCGC TCCGCATTGC GGGAGGACCC GGACGTGATC 
CTGGTGGGGG AAATGCGCGA CCTGGAAACC ATCCGCCTGG CGCTGACCGC GGCCGAGACC 
GGCCACCTGG TGTTCGGCAC CCTGCACACC AGTTCCGCCG CCAAGACCAT CGACCGCATC 
GTCGACGTAT TTCCCGCCGC GGAGAAAGAG ATGATCCGCT CCATGCTGTC GGAATCGCTG 
CAAGCGGTTA TTTCGCAGGC TCTGGTCAAG AAGGCCGGCG GCGGCCGGAC CGCGGCCTGG 
GAGATCATGG TCGGCACACC GGCCATCCGC AACCTGATCC GCGAGGCCAA GGTGGCCCAG 
ATGTATTCGA CGATCCAGAC CGGCCGCAAG GACGGCATGC AGACCCTGGA CCAGCACCTG 
CAGGAGCTGG TGGAGAAAGG GATCGTCACC CGGCAGGTCG CCCGCGAAGT CGCCGTCAAC 
AAAGCCGCGT TCTAG 

 

Protein sequence

MDIAELLAFS VKNKSSDLHL SSGLPPMIRV DGDIRRINVP PLEHKEVHAL IYDIMNDKQR 
RDFEEFLETD FSFELPGVAR FRVNAFNQDR GAAAVFRTIP SKVLTLEELG CPKFFQDVTR 
QPRGLIVVTG PTGSGKSTTL AAMIDYINSN DYSHILTIED PIEFVHQSKK CLINQREVHR 
NTLGFNEALR SALREDPDVI LVGEMRDLET IRLALTAAET GHLVFGTLHT SSAAKTIDRI 
VDVFPAAEKE MIRSMLSESL QAVISQALVK KAGGGRTAAW EIMVGTPAIR NLIREAKVAQ 
MYSTIQTGRK DGMQTLDQHL QELVEKGIVT RQVAREVAVN KAAF