| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | MCA1478 |
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| Symbol | |
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| ID | 3104665 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Methylococcus capsulatus str. Bath |
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| Kingdom | Bacteria |
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| Replicon accession | NC_002977 |
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| Strand | - |
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| Start bp | 1571117 |
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| End bp | 1572100 |
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| Gene Length | 984 bp |
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| Protein Length | 327 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 637170653 |
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| Product | signal peptide peptidase SppA, putative |
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| Protein accession | YP_113935 |
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| Protein GI | 53804454 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG0616] Periplasmic serine proteases (ClpP class) |
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| TIGRFAM ID | [TIGR00706] signal peptide peptidase SppA, 36K type |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.484654 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAATGAGG ATTCCACCCC CCAGTCGTCG ACCGAATCGG CCCGTTCCTG TTCCGTCTGG
GAACGGGAAG CGCTGGAAAA GCTCCTGCTC GAAGCGCTGG TGGAACAGCG GAGGGCACGG
CGGTGGAACC TGGCGTTCAG GGCCTTTCTG GTTGCCGCGA TCGGGCTCGG CCTCGTACTG
GCCTTCAAGC CGCTGGCTCA TGACGGTCTG ACGGCGTCCG GCAAGTCACA CACGGCGGTG
GTGGATGTGA CCGGCACCAT CGCCGAAGGC GGCGAAACCG ATGCCGACAC CATTATCGAG
GGGCTGCGCG AAGCGGCCGA GGCCAAAGGG GTGAAAGGCA TCGTCCTCAG GATGAACACG
CCGGGTGGCA GTCCGGTGCA ATCGGCCTAT GTCTACGATG AGATCCGCAG GATCAAGAAA
GAGCATCCGG CGCTGCCGGT CTATGCCGTG GTGACCGATG TTTGTGCCTC AGGGGGTTAT
TACATCGCCT CGGCCACGGA TAGGATCTTC GTGAACCCGG CCAGTATCGT CGGCTCGATC
GGCGTCATCA TGAACGGTTT CGGCTTCGTC GGCACGCTGG AGAAACTGGG GGTGGAGCGT
CGGGTAATGA CGGCGGGCGA TCACAAGGCG ATCCTCGATC CGTTCGGTCC GGTGGATCCG
GTCGAGAAAC AGCATGTACA GCGTTTGCTG AACACGGTCC ACCAGCAGTT CATCGCTGCG
GTGAAAGCCG GCCGTGGCGA TCGGCTCAAG GACCGGCCCG AAATCTTCTC GGGCCTTGTG
TGGACCGGGG CCGAGGGGAT CGAGCTCGGA CTGGTGGATG CCGTCGGCGA ACTGCATGAG
GTGGCCGAGA CGGTCATCGG GGCCAAGGAG ATCGTGAATT ACTCGCACCG GGAAACCCTG
CTGGACCGCG TCGTCCGGCA ACTGGGCACC AGCCTGGAAG CGGCTTTGAC GAAACTGTCC
GCCTCGTCGC CGCGCCTGTA CTGA
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| Protein sequence | MNEDSTPQSS TESARSCSVW EREALEKLLL EALVEQRRAR RWNLAFRAFL VAAIGLGLVL
AFKPLAHDGL TASGKSHTAV VDVTGTIAEG GETDADTIIE GLREAAEAKG VKGIVLRMNT
PGGSPVQSAY VYDEIRRIKK EHPALPVYAV VTDVCASGGY YIASATDRIF VNPASIVGSI
GVIMNGFGFV GTLEKLGVER RVMTAGDHKA ILDPFGPVDP VEKQHVQRLL NTVHQQFIAA
VKAGRGDRLK DRPEIFSGLV WTGAEGIELG LVDAVGELHE VAETVIGAKE IVNYSHRETL
LDRVVRQLGT SLEAALTKLS ASSPRLY
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