| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | MCA1467 |
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| Symbol | |
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| ID | 3102844 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Methylococcus capsulatus str. Bath |
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| Kingdom | Bacteria |
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| Replicon accession | NC_002977 |
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| Strand | - |
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| Start bp | 1557968 |
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| End bp | 1559389 |
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| Gene Length | 1422 bp |
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| Protein Length | 473 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 637170642 |
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| Product | serine protease, MucD |
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| Protein accession | YP_113924 |
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| Protein GI | 53804465 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG0265] Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain |
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| TIGRFAM ID | [TIGR02037] periplasmic serine protease, Do/DeqQ family |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.627151 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTTTGACC GATACCGTTT TGTCGGCGCC ATTTGTGCGG CGCTGGTGCT GGCCGTTTCG
CCGCCAGCCC GGGCCCAGCT TCCCGATTTC ACCCAGCTGG TTGAACAGAA CAACGCCGCC
GTCGTGAACA TCAGCACCAC CCAGAAAGTG GCCGCCAACG AACAGCAGAT GCCGGAGGGT
CTGGAGATTC CGGAGGGCAC GCCGTTCGAC GATTTTTTCC GGCATTACTT TGGCGAAGGC
GGGGGTAGCG ACGGCCAGCC GAGCGAGGCG AAGTCCCTGG GTTCGGGTTT CATCATGTCG
GCGGATGGCT ATATCATCAC CAATCACCAC GTCGTGAAAG GGGCCGATGA GATCGTGGTG
CGACTGCAGG ACCGGCGGGA GCTGGTGGCG AAGATCGTTG GGTCCGACAA GCGTAGTGAC
GTCGCCCTGC TCAAGATCGA GGCCAGCCAG CTGCCCACGG TGAAGCTGGG GTCGTCCGAA
AAGCTCAAGG TCGGCGAATG GGTGCTCGCC ATCGGCTCGC CTTTCGGATT CGACCATTCC
GCCACCGCCG GCATCGTCAG CGCCAAGGGG CGCAGCCTTC CCAGCGACAA TTACGTGCCG
TTCATACAGA CCGACGTGGC CATCAACCCT GGCAACTCGG GAGGACCGCT GTTCAATCTG
AACGGCGAAG TGGTCGGCGT CAATTCCCAG ATCTACAGCC GTACCGGCGG CTTCATGGGG
CTGTCCTTCG CCATTCCCAT CGAAGTCGCC ATGCAGGTGG TGGACCAGCT CAAAGCCAGC
GGAAGGGTTT CCCGCGGCTG GCTGGGTGTC CAGATCCAAG ACGTGACGCG AGAGCTGGCC
GAGTCCTTCG ACATGAAGAA ACCACAAGGC GCCCTGGTAT CCAAGGTTCT TTCGAAGAGC
CCGGCCGAAG CGGCCGGCGT CCAGATCGGC GACATCGTGC TGGAATTCAA CGGCCAGGCG
GTGGACACGT CGGCTGCGCT GCCGCCCATG GTAGGCATGA CCAAGGTCGG CGAAGTCGCC
AAAATCAAGT TGTTACGTAA CGGTGCGATC AAGGAGCTGA GTATCAAGAT CGGAGCGCTC
CCCGATGAGG AAGAACCGGC GATGGGTACC GCCGAGCCCG ATGCGGTACC GCTGAAGCGC
ATGGGAGCCA GCGTGGCCGA TCTGACCCCG GAACTGCGCG AGCAGTTCGA GGTGCCACGG
GGCGGGGTGC TCGTCTACGG CGTCAATCCC GGTCCCGCCT ACGAGGCAGG GCTGCGGCGC
GGAGACGTGA TCCTCCGGAT TCAGGACAAG GAAATCAACG GCGTGAAACA ATTGGTAGAG
TTGGAGAAGA CCCTGCCGGC AGGGAAATCG CTGGCGGTGC TGGTGCAGCG GCGCGATGGC
TCCATCTTCC TGGCGATGAA ATTGAAAGAC GAAAAGCAGT GA
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| Protein sequence | MFDRYRFVGA ICAALVLAVS PPARAQLPDF TQLVEQNNAA VVNISTTQKV AANEQQMPEG
LEIPEGTPFD DFFRHYFGEG GGSDGQPSEA KSLGSGFIMS ADGYIITNHH VVKGADEIVV
RLQDRRELVA KIVGSDKRSD VALLKIEASQ LPTVKLGSSE KLKVGEWVLA IGSPFGFDHS
ATAGIVSAKG RSLPSDNYVP FIQTDVAINP GNSGGPLFNL NGEVVGVNSQ IYSRTGGFMG
LSFAIPIEVA MQVVDQLKAS GRVSRGWLGV QIQDVTRELA ESFDMKKPQG ALVSKVLSKS
PAEAAGVQIG DIVLEFNGQA VDTSAALPPM VGMTKVGEVA KIKLLRNGAI KELSIKIGAL
PDEEEPAMGT AEPDAVPLKR MGASVADLTP ELREQFEVPR GGVLVYGVNP GPAYEAGLRR
GDVILRIQDK EINGVKQLVE LEKTLPAGKS LAVLVQRRDG SIFLAMKLKD EKQ
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