Gene MCA1415 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMCA1415 
SymbolaroA 
ID3103431 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethylococcus capsulatus str. Bath 
KingdomBacteria 
Replicon accessionNC_002977 
Strand
Start bp1501120 
End bp1502388 
Gene Length1269 bp 
Protein Length422 aa 
Translation table11 
GC content67% 
IMG OID637170590 
Product3-phosphoshikimate 1-carboxyvinyltransferase 
Protein accessionYP_113872 
Protein GI53804255 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0128] 5-enolpyruvylshikimate-3-phosphate synthase 
TIGRFAM ID[TIGR01356] 3-phosphoshikimate 1-carboxyvinyltransferase 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.586582 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCAGGGCG ACATCCGGGT ACCGGGCGAC AAGTCCATCT CCCACCGGTC GGTGATGCTG 
GGCTCGCTCG CCGAGGGCGT GACTGAGGTG AGTGGCTTCC TCCAGGCTGA GGACTGTTTG
GCGACCATGG CGGCGTTCCG GGCCATGGGC GTCGAAATCG AAGGCCCGAC GGAGGGCCGG
CTGCGGATCC ACGGCGTCGG CCTGCACGGC CTGAAGCCAC CTGCCGCCCC CCTGGATCTC
GGCAATTCCG GCACCTCCAT GCGGCTATTG AGCGGACTGT TGGCGGGACA GGCATTCGAC
ACCACGCTGA CCGGCGATGC CTCCCTGGTG CGCCGGCCGA TGCGGCGGGT GACCGAACCG
CTGCGCGCCA TGGGCGCGCG GATCGACACC ACCGAAGCCG GCACCGCGCC ACTGCGCATC
GCCGGCGGAA GCCGCCTCAA AGGGATCGAC TATGCGATGC CGGTCGCCAG CGCCCAGGTG
AAATCCTGTC TGCTGCTGGC GGGCCTCTAC GCGGAAGGGA AGACCTGTGT CACCGAGCCG
GCGCCGACCC GCGACCACAC CGAACGCATG CTGGCGGGTT TCGGCTATCC GGTGGCGCGA
GATGGCAACC GTGTATGCAT CCAATCCGGC GGCAAGCTTT CCGCGACCCG TATCGACGTA
CCGGCGGACA TTTCCTCGGC GGCGTTCTTC ATGATAGGCG CAGCGATCAG CCCTGGGTCC
GACGTGTTCC TCCGCCATGT CGGGATCAAT CCGACCCGGA CCGGCGTCAT CGAAATCCTG
CGCGAAATGG GCGCCGACAT CGAGATACTC GCTCCGCGCG AAGTCGGCGG TGAACCGGTG
GCGGACCTCC GCATCCGTTA CCGGGAACTG CGCGGCATCC GCATTCCCGA ACATACCGTG
CCGCTGGCCA TTGACGAATT CCCGGCCCTG TTCATCGCCG CAGCCTGCGC CACAGGCGAA
ACGGTGCTGA CCGGGGCCGA GGAGCTGCGA GTCAAGGAAA GCGACCGTAT CCAGGCCATG
GCCGACGGCC TGACCACGCT GGGCATCGAT GCCCGCCCGA CCCCCGATGG CATGGTCATC
CGGGGCGGGA GTTTCCGCGG CGGCGCAGTC GATTCGCGCG GCGATCATCG CATCGCCATG
TCATTCTCGA TCGCGGCATT GCGCGCTCCC ATCCCCATCG AGATTCACGA CTGCGCCAAC
GTGGCGACAT CTTTTCCCAA TTTCGTCGAA CTGGCGCGGA CCCTGGGTTT GGACATCGAG
GTCAGCTGA
 
Protein sequence
MQGDIRVPGD KSISHRSVML GSLAEGVTEV SGFLQAEDCL ATMAAFRAMG VEIEGPTEGR 
LRIHGVGLHG LKPPAAPLDL GNSGTSMRLL SGLLAGQAFD TTLTGDASLV RRPMRRVTEP
LRAMGARIDT TEAGTAPLRI AGGSRLKGID YAMPVASAQV KSCLLLAGLY AEGKTCVTEP
APTRDHTERM LAGFGYPVAR DGNRVCIQSG GKLSATRIDV PADISSAAFF MIGAAISPGS
DVFLRHVGIN PTRTGVIEIL REMGADIEIL APREVGGEPV ADLRIRYREL RGIRIPEHTV
PLAIDEFPAL FIAAACATGE TVLTGAEELR VKESDRIQAM ADGLTTLGID ARPTPDGMVI
RGGSFRGGAV DSRGDHRIAM SFSIAALRAP IPIEIHDCAN VATSFPNFVE LARTLGLDIE
VS